CURRICULUM VITAE

GENERAL

	TANMOY BHATTACHARYA
	Scientist 5 and Laboratory Fellow, 
	Los Alamos National Laboratory and
	External Professor, Santa Fe Institute
	Los Alamos, NM 87545
	United States of America
	+1 (505) 665 4733
	
	Date of birth: 5th November, 1962

EDUCATION

1982
B. Sc. in Physics, IIT, Kharagpur, India
1984
M. Sc. in Physics, IIT, Kharagpur, India;
Dissertation advisor: Prof. Debabrata Basu
1989
Ph. D. in Physics, Tata Institute of Fundamental Research, Bombay, India;
Thesis title: “Tree Unitarity Breakdown in Spontaneously Broken N=1 Supergravity Theories and Phenomenology of a Superlight Gravitino”;
Thesis advisor: Prof. Probir Roy

EMPLOYMENT

1 Nov 1989–31 Oct 1991Post-doctoral fellow at Brookhaven National Laboratory
4 Nov 1991–31 Oct 1992Post-doctoral fellow at Centre de Energie Atomique, Saclay
9 Nov 1992–7 Nov 1994Post-doctoral Fellow at Los Alamos National Laboratory
8 Nov 1994–5 Nov 1995Post-doctoral Research Associate at Los Alamos National Laboratory
6 Nov 1995–31 Jan 1999Limited Term Staff Member at Los Alamos National Laboratory
1 Feb 1999–27 Jul 2008Staff Member at Los Alamos National Laboratory
28 Jul 2008–30 Jun 2013Scientist 4 at Los Alamos National Laboratory
1 Feb 2006–31 Jan 2017Professor at Santa Fe Institute
31 Jan 2017–External Professor at Santa Fe Institute
1 Jul 2013– Scientist 5 at Los Alamos National Laboratory

Honors

1999
Los Alamos Distinguished Performance Award as member of the HIV Genetics Team
2002
Los Alamos Achievement Award as member of the HIV Database Team
2015
The Duke CHAVI-ID Outstanding Contributions Award
2016
Top 1% of most cited researcher in microbiology according to Clarivate Analytics
2018
Highly Cited Researcher in the Clarivate Analytics cross-field category
2019
Highly Cited Researcher in the Clarivate Analytics cross-field category
2020
Los Alamos Laboratory Fellow
2020
Highly Cited Researcher in the Clarivate Analytics cross-field category
2022
Los Alamos Distinguished Performance Award as member of the Lattice QCD Team
2023
Ranked among the Top Scientists in the field of Biology and Biochemistry by research.com.
2023
LANL PI of the “CANDLE (CANcer Distributed Learning Environment)” project that received an R&D 100 award in the Software/Services category.
2023
LANL Spot Award for “Initiative or creativity in addressing a critical need or difficult problem”.
2024
Elected fellow of the American Physical Society on recommendation of the Division of Computational Physics.

Memberships and Community Services

I am a member of the American Physical Society with memberships in the Division of Computational Physics, Division of Particles and Fields, Forum on Education, Forum on Physics and Society, and the Four Corners Section. I was the co-chair and then the chair of the Scientific Program Committe of the USQCD (US Lattice Quantum Chromodynamics) collaboration from 2019–2023. I was one of the subconveners for the EDM activity for the last Snowmass meeting, which defined the community input for the US scientific consensus on the direction of high energy physics for the next 5–10 years. In addition, I participated in the computational frontier and the quantum computation parts of the Snowmass process and also in the fundamental symmetries and quantum computation workshops for the nuclear physics long-range planning.

I have served on various review committees for the US Department of Energy and the National Science Foundation of the US, often for the Elementary Particle Physics Theory, Computational Physics or the High Energy Physics programs. I have also refereed book manuscripts and for journals, a summary of some of my review activity for journals is available at Publons.

I helped with the arXiv in its early days, initially doing things like scripting the auto-TeXing. I invented hyperTeX that allowed TeX to produce fully hyperlinked pdf and wrote the first design of hyperref LaTeX package. I also helped in the first design of Ghostview displaying hyperlinked postscript and pdf, as well as in an unrelated device driver, and in the development of the webserver that became Apache. Now, I am one of the moderators of the hep-lat arXiv.

I used to be a regular contributor to comp.lang.c, comp.lang.fortran, and comp.std.c newsgroups, and had contributed an example to ISO C defect reports. I am currently on the design team of International Society of Genetic Genealogy, which maintains the current Y chromosome phylogenetic tree.

I was the secretary of the LANL Fellows in 2023 and am now the coordinator.

Patents and Patent Applications

In Chinese patent applications, my name is spelt 坦莫伊·巴塔查里亚, and in Japanese as バッタチャルヤ, タンモイ. In Devanagari script it is written as तन्मय भट्टाचार्य and I spell my name in Bengali as তন্ময় ভট্টাচার্য্য.

  1. Genetic signatures in envelope glycoprotein of hiv-1. (Barton F. Haynes, David C. Montefiori, Hua-Xin Liao, Feng Gao, Bette T. Korber, S. Gnanakaran, Marcus G. Daniels, Tanmoy Bhattacharya, Alan S. Lapedes) WO 2011126576 A3, WO 2011126576 A2; priority date: Apr 9, 2010; US Provisional Application 61/322,663 (filed Apr 9, 2010). Classification: International C12N15/49, A61K39/21, A61P31/18, C07K14/155, C07K16/10, Cooperative C12N2760/16023, C12N2740/16034, C12N7/00, C07K2317/34, A61K39/21, C07K2317/76, A61K39/00, C12N2740/16122, C12N2740/16134, C07K16/1045; European C07K16/10K1, A61K39/21, C07K14/005, C12N7/00.
  2. Acute transmitted hiv envelope signatures. (Barton F. Haynes, Bette T. Korber, Beatrice H. Hahn, Tanmoy Bhattacharya, Gnana S. Gnanakaran, Feng Gao, Ron Swanstrom, George Shaw) US 20100104596 A1, WO 2008118470 A3, WO 2008118470 A2, CA 2682206 A1, CN 101969997 A, EP 2129395 A4, EP 2129395 A2, JP 2010530356 A, AU 2008231306 A1; priority date: Mar 27, 2007; US Provisional Application 60/907,259 (filed Mar 27, 2007). Classification: US 424/208.1 International A61P37/04, A61K39/21, Cooperative A61K39/21, C12N2740/16034, C12N2740/16134, C12N2740/16122; European C07K14/005, A61K39/21.
  3. Human immunodeficiency virus type 1 clade M mosaic gag polypeptides which is a continuation of Polyvalent vaccine or Immunogenic composition comprising human immunodeficiency virus (HIV) mosaic Nef proteins or Nucleic acids encoding mosaic HIV-1 gag proteins. (Bette T. Korber, Simon Perkins, Tanmoy Bhattacharya, William M. Fischer, James Theiler, Norman Letvin, Barton F. Haynes, Beatrice H. Hahn, Karina Yusim, Carla Kuiken) US 9492532, US 9011875 B2, US 8119140 B2, US 20090324631 A1, US 20110150915 A1, US 20120231028 A1, US 20150359875 A1, WO 2007024941 A3, WO 2007024941 A2, CA 2620874 A1, CN 101969996 A, EP 1917040 A4, EP 1917040 A2, AU 2006283101 A1, AU 2006283101 B2; priority date: Aug 23, 2005; US Provisional Application 60/710,154 (filed Aug 23, 2005) and US Provisional Application 60/739.413 (filed Nov 25, 2005). Classification: US 424/188.1, 424/208.1, International A61K48/00, Cooperative A61K39/21, C12N2740/16034, A61K39/00; European A61K39/21.

PUBLICATIONS

This is a roughly reverse time-ordered list of my publications. See my academic interests page for a brief description of the context in which this research sits. I have a LinkedIn profile, but this page is likely to be more complete and updated, and an Academia.edu profile. My ORCID is 0000-0002-1060-652X (QR code on right), Researcher id is J-8956-2013 , Scopus Author ID is 7006308075, MR author ID is 730531, Semantic Scholar ID is 144296799, loop ID is 767051, DBLP id is 29/5903, and VIAF id is 39029408.

My High Energy Physics Output according to the InSpire database. Image of my page on InSpire HEP

The links below from the author names go to their home pages. The ori links go directly to the papers. Note that on-line journals may need subscription. The pmid links go to pub med which provides a detailed metadata for the paper, whereas PMC's and NIHMS's go to the Pubmed Central and the NIH Manuscript Submission system which makes US government funded biomedical work available for free after an embargo period. A list of my papers on the publicly accessible e-print arXiv, which covers my physics interests, can be obtained using my arXiv public identifier bhattacharya_t_1; the arXiv identifiers on the individual entries link to the abstract of the paper on the arXiv allowing retrieval of the full text; it might be more convenient to access one of its mirror sites instead. Though every attempt is made to update them, the versions on the arXiv are not always completely up to date.

The altmetric links, if visible, provide a measure the online impact of the work and hovering over the plumx links will also provide impact measures; clicking either will provide details. The inspire links go to the InSpire HEP database, which allows a citation search in high energy physics. The InSpire publication summary page provides statistics of my career in HEP publication; and my InSpire ID is INSPIRE-00066839.

Citation count

 

Google scholar automatically maintains a citation count and the currently unmaintained site Impact Story used to maintain all kind of impact statistics resulting from a recent 100 of my publications. According to Google, on May 29, 2024, the seven most cited articles of mine had 4696, 2320, 1535, 1617, 1598, 1293, and 1073 citations. With 54 more articles with 100 citations or more and yet 29 others with 50 or more citations, overall my 354 articles had garnered 30430 citations by that date, and I had an h index of 70. Helped by the analysis of my Google Scholar profile by the Publish or Perish program, on Mar 5, 2017, I had calculated that I had 222 papers written over 32 years, resulting in an average of 398.09 citations per year and 57.38 citations per paper. The Hirsch a coefficient was 4.71, the rate m was 1.62, and the excess given by an e_index of 92.82. The average number of citations in the Hirsch core, A, was 215.7923, the median, m, was 124, and the r-index was 105.91, so that the q^2 index was 80.30. The hc_index was 37. The g_index was 112, so the hg-index was 107.7. The age-weighted citation rate was 1607.7, and the AW_index was 40.1. The h(2) index was 14. On average, the cites per author were 2240.85, the papers per author 57.64 and authors per paper were 5.06. The individualized metric, hI-index was 8.69, the hI normalized index was 26, and the hm-index was 18.26. The AWCR per Author was 258.47.

I had used similar data on Oct 18, 2013 to calculate my h index as 40, h(2) index to be 13, g index to be 86, a index to be 164.175, m index to be 103.5 and r index to be 6567.

My ResearchGate profile had a score of 42.19 on Mar 6, 2017. It was 42.08 with 823.55 impact points on Feb 22, 2016. I don't quite understand this site since I find duplicate listings of my papers there and treatment of my non-biology publications used to be distinctly odd.

The 2024 edition of the Research.com listing of biology and biochemistry professionals found 19528 citations to my 146 publications, with a d-index of 50. This made me 15498th rank in the world and 6530th in the United States.

Since like all automatic programs, it is difficult to know the accuracy of the google scholar results, I have also manually counted the number of citations each publication had on April 13, 2011. The number I quote below is the larger of the result from ISI Web of Knowledge and from the INSPIRE databases, and is an underestimate because these databases have a very uneven coverage of the various fields I work in. Also, comparing them across fields is a bit problematic. Nevertheless, the count stood at two papers with over 300 citations (317 and 395, not counting citations to responses), four more with over 100, 11 further with greater than 50 citations, 15 more with greater than 25 citations. A more robust measure is that I had over 28 (30 to be exact) papers with 28 citations or more, so my h index was 28. Similarly, my g index was 55, my w index was 9, and my E and P indices were 919 and about 677 respectively.

Miscellaneous

My Erdös number is at most 3, Dijkstra and Einstein numbers at most 5, and Wolfgang Pauli and Eugene Wigner numbers at most 4, as detailed here. My academic genealogy is traced here; the internet physics tree might be more accurate.

Publications in preparation or under review

Here is a list of papers I am currently working on. Papers meant for anonymous review suppress their titles to avoid corrupting the review process.

  1. Confinement-deconfinement transition in qubit-regularized lattice gauge theories (Shailesh Chandrasekharan, Rui Xian Siew, and Tanmoy Bhattacharya) Los Alamos report LA-UR-24-32125 In preparation.
  2. CP-violating pion-nucleon coupling (Fangcheng He, Tanmoy Bhattacharya, Emanuele Mereghetti, and Rajan Gupta) Los Alamos reports LA-UR-24-28427, In preparation.
  3. Flavor diagonal charges of the nucleon and the sigma term (Rajan Gupta, Sungwoo Park, and Tanmoy Bhattacharya) Los Alamos reports LA-UR-24-, In preparation.
  4. Gauge-Invariant Formulation of SU(N) Lattice Gauge Theories with Schwinger Fermions (Hanqing Liu, Tanmoy Bhattacharya, Shailesh Chandrasekharan, and Rajan Gupta) Los Alamos reports LA-UR-24-25480, LA-UR-24-25481, LA-UR-24-, In preparation.
  5. Gradient Flow of the Weinberg Operator (Tanmoy Bhattacharya, Shohini Bhattacharya, Vincenzo Cirigliano, Rajan Gupta, Emanuele Mereghetti, Sungwoo Park, Jun-Sik Yoo, and Boram Yoon) Los Alamos reports LA-UR-24-28189, LA-UR-24-29084, In preparation.
  6. On the claimed dependence of extracted dipole moment on the nucleon interpolating field used (Tanmoy Bhattacharya, Vincenzo Cirigliano, and Emanuele Mereghetti) Los Alamos report LA-UR-24-24974, In preparation.
  7. Impact of broadly neutralizing antibody VRC01 on the HIV transmission Bottleneck of Breakthrough Infections in Antibody-Mediated Prevention In preparation.
  8. Explainability through linear projection of keywords from saliency maps (ELiPKeSaM) (Sayera Dhaubhadel, Jamaludin Mohd-Yusof, Kumkum Ganguly, Benjamin McMahon, and Tanmoy Bhattacharya) In preparation.
  9. Comment on the claim of physical irrelevance of the QCD topological term Los Alamos report LA-UR-22-29996, In preparation.
  10. Predicting fifteen year all-cause mortality from VA medical records (Sayera Dhaubhadel, Leticia Cuellar-Hengartner, Nicolas Hengartner, Kumkum Ganguly, Ruy M. Ribeiro, Tanmoy Bhattacharya, Rebecca Hehl, Judith D. Cohn, Nathan A. Kimbrel, Jean C. Beckham, Kelly Cho, Lauren Costa, Yuk-Lam Ho, Iona Danciu, Amy C. Justice, Janet P. Tate, and Benjamin McMahon) Los Alamos report LA-UR-21-26945 and LA-UR-22-29759; In preparation.
  11. Strange and Charm Moments from Nf = 2 + 1 + 1 HISQ Lattices ( (Precision Neutron Decay Matrix Element (PNDME) Collaboration)) In preparation.
  12. Contribution of the gluon chromo-EDM to nucleon electric dipole moment (Tanmoy Bhattacharya, Vincenzo Cirigliano, Rajan Gupta, Emanuele Mereghetti, Jun-Sik Yoo, and Boram Yoon) Los Alamos report LA-UR-21-22073. In preparation.
  13. Phases of 2d massless QCD with qubit regularization or Infrared Phases of 2d QCD from Qubit Regularization (Hanqing Liu, Tanmoy Bhattacharya, Shailesh Chandrasekharan, and Rajan Gupta) Los Alamos report LA-UR-22-28886, ori:oai:arXiv.org:2312.17734 [hep-lat] [inspire]
  14. Topological terms with qubit regularization and relativistic quantum circuits (Tanmoy Bhattacharya, Shailesh Chandrasekharan, Rajan Gupta, Thomas R. Richardson, and Hersh Singh) Los Alamos report LA-UR-22-27102. Mainz Institute of Theoretical Physics preprint MITP-23-013. ori:oai:arXiv.org:2310.06805 [hep-lat] [inspire].
  15. Comparison of diverse machine learning (ML) models of Major Adverse Cardiovascular Events (MACE) in 4.2 million US Veterans or MACE prediction using high-dimensional machine learning and mechanistic interpretation: A longitudinal cohort study in US veterans (Sayera Dhaubhadel, Ruy M. Ribeiro, Kumkum Ganguly, Nicolas W. Hengartner, Tanmoy Bhattacharya, Beauty Kolade, Judith D. Cohn, James M. Hyman, Khushbu Agarwal, Kelly Cho, Lauren Costa, Yuk-Lam Ho, Allison E. Murata, Glen H. Murata, Jason L. Vassy, Daniel C. Posner, J. Michael Gaziano, Yan V. Sun, Peter W. Wilson, Ravi Madduri, Amy C. Justice, Phil Tsao, Christopher J. O'Donnel, Scott Damrauer, and Benjamin H. McMahon) Los Alamos report LA-UR-22-29761; medRxiv 2022.10.31.22281742 ori:doi:10.1101/2022.10.31.22281742 In revision.
  16. Vacuum Entanglement Harvesting in the Ising Model (Hersh Singh, Tanmoy Bhattacharya, Shailesh Chandrasekharan, and Rajan Gupta) Los Alamos report LA-UR-21-26805. ori:oai:arXiv.org:2302.12858 [hep-lat]. In revision. [inspire].
  17. Bayesian estimation of HIV acquisition dates for prevention trials or Use of acute HIV-1 sequence and diagnostic data from the FRESH and RV217 cohorts to evaluate acquisition timing estimation with application to the Antibody Mediated Prevention (AMP) trials (Raabya Rossenkhan, Elena E. Giorgi, Danica Shao, James Ludwig, Phillip Labuschagne, Craig A. Margaret, Thumbi Ndung'u, Daniel Muema, Kamini Gounder, Krista L. Dong, Bruce D. Walker, Morgane Rolland, Merlin L. Robb, Leigh Anne Eller, Fredrick Sawe, Sorachai Nitayaphan, Eduard Grebe, Michael P. Busch, Kevin P. Delaney, Shelly Facente, Lindsay N. Carpp, Allan C. deCamp, Yunda Huang, Bette Korber, Michal Juraska, Erika Rudnicki, Ewelina Kosmider, Daniel B. Reeves, Bryan T. Mayer, John Hural, Wenjie Deng, Dylan H. Westfall, Anna Yssel, David Matten, Tanmoy Bhattacharya, Lawrence Corey, Peter B. Gilbert, Carolyn Williamson, James I. Mullins, and Paul T. Edlefsen) Los Alamos report LA-UR-24-23873. In review.
  18. An explainability module for analysis of DAC extraction from cancer pathology reports (Sayera Dhaubhadel, Jamaludin Mohd-Yusof, Kumkum Ganguly, Benjamin McMahon, and Tanmoy Bhattacharya) Los Alamos report LA-UR-23-21470. In review.

Papers and refereed conference papers

These are my publications published (or in press) in peer-reviewed venues or resulting from peer-reviewed conference submissions.

  1. Theoretical tools for neutrino scattering: interplay between lattice QCD, EFTs, nuclear physics, phenomenology, and neutrino event generators (L. Alvarez Ruso, A. M. Ankowski, S. Bacca, A. B. Balantekin, J. Carlson, S. Gardener, R. González-Jiménez, R. Gupta, T. J. Hobbs, M. Hoferichter, J. Isaacson, N. Jachowicz, W. I. Jay, T. Katori, F. Kling, A. S. Kronfeld, S. W. Li, H.-W. Lin, K.-F. Liu, A. Lovato, K. Mahn, J. Menéndez, A. S. Meyer, J. Morfin, S. Pastori, N. Rocco, M. Sajjad Athar, T. Sato, A. Schwenk, P. E. Shanahan, L. E. Strigari, M. Wagman, X. Zhang, Y. Zhao, B. Acharya, L. Andreoli, C. Andreopoulos, J. L. Barrow, T. Bhattacharya, V. Brdar, Z. Davoudi, C. Giusti, Y. Hayato, A. N. Khan, D. Kim, Y. F. Li, M. Lin, P. Machado, M. Martini, K. Niewczas, P. Pandey, A. Papadopolou, R. Plestid, M. Roda, I. Ruiz Simo, J. N. Simone, R. S. Sufian, J. Tena-Vidal, O. Tomalak, Y.-D. Tsai, and J. M. Udías) DESY report DESY-22-05, Fermilab report FERMILAB-FN-1161-T, MIT report MITP-22-027, Los Alamos National Laboratory report LA-UR-22-22647 ori:oai:arXiv.org:2203.09030 [hep-ph] Journal of Physics G In press. [inspire].
  2. Control variates for lattice field theory (Tanmoy Bhattacharya, Scott Lawrence, and Jun-Sik Yoo) Los Alamos report LA-UR-23-28228, ori:oai:arXiv.org:2307.14950 [hep-lat] Physical Review D109 (2024) L031505; ori:doi:10.1103/PhysRevD.109.L031505. Published 23 February, 2024. [inspire]
  3. High dimensional predictions of suicide risk in 4.2 million US Veterans using ensemble transfer learning or High dimensional predictions of suicide risk in millions of US Veterans (Sayera Dhaubhadel, Kumkum Ganguly, Ruy M. Ribeiro, Judith D. Cohn, James M. Hyman, Nicolas W. Hengartner, Beauty Kolade, Anna Singley, Tanmoy Bhattacharya, Patrick Finley, Drew Levin, Haedi Thelen, Kelly Cho, Lauren Costa, Yuk-Lam Ho, Amy C. Justice, John Pestian, Daniel Santel, Rafael Zamora-Resendiz, Silvia Crivelli, Suzanne Tamang, Susana Martins, Jodie Trafton, David W. Oslin, Jean C. Beckham, Nathaniel A. Kimbrel, Million Veteran Program Suicide Exemplar Work Group (Khushbu Agarwal, Allison E. Ashley-Koch, Mihaela Aslan, Jean C. Beckham, Edmond Begoli, Tanmoy Bhattacharya, Ben Brown, Patrick S. Calhoun, Kei-Hoi Cheung, Sutanay Choudhury, Ashley M. Cliff, Judith D. Cohn, Silvia Crivelli, Leticia Cuellar-Hengartner, Haedi E. Deangelis, Michelle F. Dennis, Sayera Dhaubhadel, Patrick D. Finley, Kumkum Ganguly, Michael R. Garvin, Joel E. Gelernter, Lauren P. Hair, Colby Ham, Phillip D. Harvey, Elizabeth R. Hauser, Michael A. Hauser, Nick W. Hengartner, Daniel A. Jacobson, Jessica Jones, Piet C. Jones, David Kainer, Alan D. Kaplan, Ira R. Katz, Rachel L. Kember, Nathan A. Kimbrel, Angela C. Kirby, John C. Ko, Beauty Kolade, John Lagergren, Matthew Lane, Daniel F. Levey, Drew Levin, Jennifer H. Lindquist, Xianlian Liu, Ravi K. Madduri, Carrie Manore, Carianne Martinez, Susana B. Martins, John F. McCarthy, Mikaela McDevitt Cashman, Benjamin H. McMahon, J. Izaak Miller, Destinee Morrow, David W. Oslin, Mirko Pavicic-Venegas, John P. Pestian, Saiju Pyarajan, Xue J. Qin, Nallakkandi Rajeevan, Christine M. Ramsey, Ruy Ribeiro, Alex Rodriguez, Jonathon Romero, Daniel Santel, Yunling Shi, Murray B. Stein, Kyle A. Sullivan, Ning Sun, Suzanne R. Tamang, Alice Townsend, Jodie A. Trafton, Angelica Walker, Xiange Wang, Victoria Wangia-Anderson, Renji Yang, Shinjae Yoo, Rafael Zamora-Resendiz, and Hongyu Zhao), and Benjamin H. McMahon) Los Alamos report LA-UR-22-29760; Research Square 24 August 2023, preprint (Version 1) ori:doi:10.21203/rs.3.rs-3276492/v1 Scientific Reports 14 (January 20, 2024) 1793; ori:doi:10.1038/s41598-024-51762-9; pmid:38245528, PMC10799879.
  4. A broadly neutralizing antibody’s prevention efficacy depends on HIV-1 envelope sequence features in the Antibody Mediated Prevention trials or Prevention efficacy of the broadly neutralizing antibody VRC01 depends on HIV-1 envelope sequence features (Michal Juraska, Hongjun Bai, Allan C. deCamp, Craig A. Margaret, Li Li, Kevin Gillespie, Lindsay N. Carpp, Elena E. Giorgi, James Ludwig, Cindy Molitor, Aaron Hudson, Brian D. Williamson, Nicole Espy, Brian Simpkins, Erika Rudnicki, Danica Shao, Raabya Rossenkhan, Paul T. Edlefsen, Dylan H. Westfall, Wenjie Deng, Lennie Chen, Hong Zhao, Tanmoy Bhattacharya, Alec Pankow, Ben Murrell, Anna Yssel, David Matten, Talita York, Nicolas Beaume, Asanda Gwashu-Nyangiwe, Nonkululeko Ndabambi, Ruwayhida Thebus, Shelly T. Karuna, Lynn Morris, David C. Montefiori, John A. Hural, Myron S. Cohen, Lawrence Corey, Morgane Rolland, Peter B. Gilbert, Carolyn Williamson, James I. Mullins) Los Alamos report LA-UR-23-25710 May 2023. Proceedings of National Academy of Sciences 121:4 (January 19, 2024) e2308942121; ori:doi:10.1073/pnas.2308942121; pmid:38241441. PMC10823214
  5. Nucleon Isovector Axial Form Factors (Yong-Chull Jang, Rajan Gupta, Tanmoy Bhattacharya, Boram Yoon, and Huey-Wen Lin (Precision Neutron Decay Matrix Element (PNDME) Collaboration)) Los Alamos report LA-UR-23-25225; ori:oai:arXiv.org:2305.11330 [hep-lat] Physical Review D109:1 (2024) 014503; ori:doi:10.1103/PhysRevD.109.014503 Published January 5, 2024. [inspire].
  6. Deep learning uncertainty quantification for clinical text classification or Uncertainty quantification for deep learning models for clinical text classification (Alina Peluso, Ioana Danciu, Hong-Jun Yoon, Jamaludin Mohd Yusof, Tanmoy Bhattacharya, Adam Spannaus, Noah Schaefferkoetter, Eric B. Durbin, Xiao-Cheng Wu, Antoniette Stroup, Jennifer Doherty, Stephen Schwarz, Charles Wiggins, Linda Coyle, Lynne Penberthy, Georgia D. Tourassi, and Shang Gao) Los Alamos report LA-UR-22-23086 Journal of Biomedical Informatics 149 (January 2024) 104576; ori:doi:10.1016/j.jbi.2023.104576; pmid:38101690. Available online 13 December 2023
  7. Confronting axial-vector form factor from lattice QCD with MINERvA antineutrino-proton data (Oleksandr Tomalak, Rajan Gupta, and Tanmoy Bhattacharya) Los Alamos report LA-UR-23-28229, CETUP* 2023 report CETUP-2023-001, ori:oai:arXiv.org:2307.14920 [hep-lat] Physical Review D108:7 (2023) 074514; ori:doi:10.1103/PhysRevD.108.074514 Published 23 October 2023. [inspire]
  8. Quark Chromo-Electric Dipole Moment Operator on the Lattice (Tanmoy Bhattacharya, Vincenzo Cirigliano, Rajan Gupta, Emanuele Mereghetti, Jun-Sik Yoo, and Boram Yoon) Los Alamos report LA-UR-21-21913, Institute of Nuclear Theory preprint INT-PUB-23-013. ori:oai:arXiv.org:2304.09929 [hep-lat] Physical Review D108:7 (2023) 074507; ori:doi:10.1103/PhysRevD.108.074507 Published October 10, 2023. [inspire].
  9. Electroweak box diagram contribution for pion and kaon decay from lattice QCD (Jun-Sik Yoo, Tanmoy Bhattacharya, Rajan Gupta, Santanu Mondal, and Boram Yoon) Los Alamos report LA-UR-23-24250, ori:oai:arXiv.org:2305.03198 [hep-lat] Physical Review D108:3 (1 August 2023) 034508; ori:doi:10.1103/PhysRevD.108.034508. Published 18 August 2023. [inspire]
  10. Quantum Simulations for High-energy Physics (Christian W. Bauer, Zohreh Davoudi, A. Baha Balantekin, Tanmoy Bhattacharya, Marcela Carena, Wibe A. de Jong, Patrick Draper, Aida El-Khadra, Nate Gemelke, Masanori Hanada, Dmitri Kharzeev, Henry Lamm, Ying-Ying Li, Junyu Liu, Mikhail Lukin, Yannick Meurice, Christopher Monroe, Benjamin Nachman, Guido Pagano, John Preskill, Enrico Rinaldi, Alessandro Roggero, David I. Santiago, Martin J. Savage, Irfan Siddiqi, George Siopsis, Nathan Wiebe, David Van Zanten, Yukari Yamauchi, Kübra Yeter-Aydeniz, and Silvia Zorzetti) University of Maryland report UMD-PP-022-04; Los Alamos report LA-UR-22-22100; RIKEN report RIKEN-iTHEMS-Report-22; Fermilab report FERMILAB-PUB-22-249-SQMS-T; InQubator for Quantum Simulation report IQuS@UW-21-027; The MITRE Corporation report MITRE-21-03848-2; ori:oai:arXiv.org:2204.03381 [quant-ph] Physical Review X Quantum 4:2 (1 May 2023) 027001; ori:doi:10.1103/PRXQuantum.4.027001. [inspire].
  11. Why I'm not Answering: Understanding Determinants of Classification of an Abstaining Classifier for Cancer Pathology Reports (Sayera Dhaubhadel, Jamaludin Mohd-Yusof, Kumkum Ganguly, Gopinath Chennupati, Sunil Thulasidasan, Nicolas Hengartner, Brent J. Mumphrey, Eric B. Durban, Jennifer A. Doherty, Mireille Lemieux, Noah Schaefferkoetter, Georgia Tourassi, Linda Coyle, Lynne Penberthy, Benjamin McMahon, Tanmoy Bhattacharya) Los Alamos report LA-UR-20-27364 ori:oai:arXiv.org:2009.05094 [cs.LG] BMC Supplements In press.
  12. Spacetime symmetric qubit regularization of the asymptotically free two-dimensional O(4) model or Space-time symmetric qubit regularization of the asymptotically free two-dimensional O(4) model (Junzhe Zhou, Hersh Singh, Tanmoy Bhattacharya, Shailesh Chandrasekharan, and Rajan Gupta) Los Alamos report LA-UR-21-30982, Institute for Nuclear Theory report INT-PUB-21-023, InQubator for Quantum Simulations report IQS@UW-21-013. ori:oai:arXiv.org:2111.13780 [hep-lat] Physical Review D105:5 (1 March 2022) 054510; ori:doi:10.1103/PhysRevD.105.054510. Published 21 March 2022. [inspire].
  13. Precision Nucleon Charges and Form Factors Using (2+1)-flavor Lattice QCD (Sungwoo Park, Rajan Gupta, Boram Yoon, Santanu Mondal, Tanmoy Bhattacharya, Yong-Chull Jang, Bálint Joó, and Frank Winter (Nucleon Matrix Elements (NME) Collaboration)) Los Alamos report LA-UR-21-20526; ori:oai:arXiv.org:2103.05599 [hep-lat] Physical Review D105:05 (2022) 054505; ori:doi:10.1103/PhysRevD.105.054505 Published March 10, 2022. [inspire].
  14. Pion-nucleon sigma term from lattice QCD or The nucleon sigma term from lattice QCD (Rajan Gupta, Sungwoo Park, Martin Hoferichter, Emanuele Mereghetti, Boram Yoon, and Tanmoy Bhattacharya) Los Alamos report LA-UR-21-24759. ori:oai:arXiv.org:2105.12095 [hep-lat] Physical Review Letters 127:24 (10 December 2021) 242002; ori:doi:10.1103/PhysRevLett.127.242002 Published December 7, 2021. pmid:34951792. [inspire].
  15. A Simple and Effective Baseline for Out-of-Distribution Detection using Abstention or An Effective Baseline for Robustness to Distributional Shift (Sushil Thapa, Sunil Thulasidasan, Sayera Dhaubhadel, Gopinath Chennupati, Tanmoy Bhattacharya, and Jeffrey Bilmes) Los Alamos report LA-UR-20-25378 and LA-UR-21-30506. Proceedings of 20th IEEE International Conference on Machine Learning and Applications (ICMLA2021), Virtually online 13–16 December, 2021, 278–285; ori:doi:10.1109/ICMLA52953.2021.00050; Conference Paper 408. Published December 15, 2021. (Rejected from ICLR 2021 Paper 2981, Rejected from UAI 2021 paper 508.) ori:oai:arXiv.org:2105.07107 [cs.LG]
  16. Uncertainty Bounds for Multivariate Machine Learning Predictions on High-Strain Brittle Fracture (Cristina Garcia-Cardona, M. Giselle Fernández-Godino, Daniel O’Malley, and Tanmoy Bhattacharya) Los Alamos report LA-UR-20-30015, Livermore report LLNL-JRNL-817876; ori:oai:arXiv.org:2012.15739 [cond-mat.mtrl-sci] Computational Materials Science, 201 (January 2022) 110883; ori:doi:10.1016/j.commatsci.2021.110883. Published online September 30, 2021.
  17. HIV-1 and SARS-CoV-2: Patterns in the Evolution of Two Pandemic Pathogens (Will Fischer, Elena E. Giorgi, Srirupa Chakraborty, Kien Nguyen, Tanmoy Bhattacharya, James Theiler, Pablo A. Goloboff, Hyejin Yoon, Werner Abfalterer, Brian T. Foley, Houriiyah Tegally, James Emmanuel San, Tulio de Oliveira, Network for Genomic Surveillance in South Africa (NGS-SA) (Eduan Wilkinson, Nokukhanya Msomi, Arash Iranzadeh, Vagner Fonseca, Deelan Doolabh, Emmanuel James San, Koleka Mlisana, Anne von Gottberg, Sibongile Walaza, Mushal Allam, Arshad Ismail, Thabo Mohale, Allison J. Glass, Susan Engelbrecht, Gert Van Zyl, Wolfgang Preiser, Francesco Petruccione, Alex Sigal, Diana Hardie, Gert Marais, Marvin Hsiao, Stephen Korsman, Mary-Ann Davies, Lynn Tyers, Innocent Mudau, Denis York, Caroline Maslo, Dominique Goedhals, Shareef Abrahams, Oluwakemi Laguda-Akingba, Arghavan Alisoltani-Dehkordi, Adam Godzik, Constantinos Kurt Wibmer, Bryan Trevor Sewell, José Lourenço, Sergei L Kosakovsky Pond, Steven Weaver, Marta Giovanetti, Luiz Carlos Junior Alcantara, Darren Martin, Jinal N. Bhiman, Carlolyn D. Williamson), S Gnanakaran, and Bette Korber) Los Alamos report LA-UR-21-23163; Cell Host and Microbe 29:7 (July 14, 2021) 1093–1110; ori:doi:10.1016/j.chom.2021.05.012. pmid:34242582; PMC8173590. Published online June 3, 2021.
  18. Contribution of the QCD Θ-term to neutron electric dipole moment (Tanmoy Bhattacharya, Vincenzo Cirigliano, Rajan Gupta, Emanuele Mereghetti, and Boram Yoon) Los Alamos report LA-UR-20-30515. ori:oai:arXiv.org:2101.07230 [hep-lat] Physical Review D103:11 (2021) 114507; ori:doi:10.1103/PhysRevD.103.114507 Published online June 10, 2021. [inspire].
  19. Uncertainty Quantification for Deep Learning Regression Models in the Low Data Limit (Cristina Garcia-Cardona, Yen Ting Lin, and Tanmoy Bhattacharya) Los Alamos reports LA-UR-21-21550, LA-UR-21-22482. Proceedings of the 4th International Conference on Uncertainty Quantification in Computational Sciences and Engineering (UNCECOMP 2021), Streamed from Athens, Greece 27–30 June, 2021, Eds. M. Papadrakakis, V. Papadopoulos, and G. Stefanou, article 19145. European Community on Computational Methods in Applied Sciences (ECCOMAS) Proceedia 8045 (2021) 379–393; ori:doi:10.7712/120221.8045.19145 Published September 2021.
  20. Qubit regularization of asymptotic freedom (Tanmoy Bhattacharya, Alexander J. Buser, Shailesh Chandrasekharan, Rajan Gupta, and Hersh Singh) Los Alamos report LA-UR-20-29558; ori:oai:arXiv.org:2012.02153 [hep-lat] Physical Review Letters 126:17 (2021) 172001; ori:doi:10.1103/PhysRevLett.126.172001 Published April 27, 2021. pmid:33988408; [inspire].
  21. Nucleon Momentum Fraction, Helicity and Transversity from 2+1-flavor Lattice QCD (Santanu Mondal, Rajan Gupta, Sungwoo Park, Boram Yoon, Tanmoy Bhattacharya, Bálint Joó, and Frank Winter (Nucleon Matrix Elements (NME) Collaboration)) Los Alamos report LA-UR-20-28586; ori:oai:arXiv.org:2011.12787 [hep-lat] Journal of High Energy Physics 2021:04 (2021) 44; ori:doi:10.1007/JHEP04(2021)044 Published April 07, 2021. [inspire].
  22. State preparation and measurement in a quantum simulation of the O(3) sigma model or Quantum simulation of the qubit-regularized O(3)-sigma model (Alexander J. Buser, Tanmoy Bhattacharya, Lukasz Cincio, and Rajan Gupta) Los Alamos report LA-UR-20-24538; ori:oai:arXiv.org:2006.15746 [quant-ph] Physical Review D102:11 (2020) 114514; ori:doi:10.1103/PhysRevD.102.114514 Published December 21, 2020. [inspire].
  23. Moments of nucleon isovector structure in 2+1+1-flavor QCD (Santanu Mondal, Rajan Gupta, Sungwoo Park, Boram Yoon, Tanmoy Bhattacharya, and Huey-Wen Lin (Precision Neutron Decay Matrix Element (PNDME) Collaboration)) Los Alamos report LA-UR-20-23801; MSU report MSUHEP-20-009; ori:oai:arXiv.org:2005.13779 [hep-lat] Physical Review D102:05 (2020) 054512; ori:doi:10.1103/PhysRevD.102.054512 Published September 22, 2020. [inspire].
  24. Tracking Changes in SARS-CoV-2 Spike: Evidence that D614G Increases Infectivity of the COVID-19 Virus or Tracking SARS-CoV-2 Spike mutations: evidence that D614G increases infectivity of the COVID-19 virus or Spike mutation pipeline reveals the emergene of a more transmissible form of SARS CoV-2 (Bette Korber, William M Fischer, S Gnanakaran, Hyejin Yoon, James Theiler, Werner Abfalterer, Nicholas Hengartner, Elena E Giorgi, Tanmoy Bhattacharya, Brian Foley, Kathryn M Hastie, Matthew D Parker, David G Partridge, Cariad M Evans, Timothy M Freeman, Thushan I de Silva (on behalf of the Sheffield COVID-19 Genomics group: Adrienne Angyal, Rebecca L. Brown, Laura Carrilero, Luke R. Green, Danielle C. Groves, Katie J. Johnson, Alexander J. Keeley, Benjamin B. Lindsey, Paul J. Parsons, Mohammad Raza, Sarah Rowland-Jones, Nikki Smith, Rachel M. Tucker, Dennis Wang, and Matthew D. Wyles), Charlene McDanal, Lautaro G Perez, Haili Tang, Alex Moon-Walker, Sean P Whelan, Celia C La Branche, Erica O Saphire, and David C Montefiori) Los Alamos report LA-UR-20-23199; bioRxiv 2020.04.29.069054 ori:doi:10.1101/2020.04.29.069054 Cell 182:4 (August 20, 2020) 819–827.E19; ori:doi:10.1016/j.cell.2020.06.043. pmid:32697968; PMC7332439. Published online July 2, 2020.
  25. The Role of Lattice QCD in Searches for Violations of Fundamental Symmetries and Signals for New Physics (United States Quantum Chromodynamics (USQCD) Collaboration: Vincenzo Cirigliano, Zohreh Davoudi, Tanmoy Bhattacharya, Taku Izubuchi, Phiala E. Shanahan, Sergey Syritsin, Michael L. Wagman) ori:oai:arXiv.org:1904.09704 [hep-lat] European Physics Journal A55:11 (2019) 197; ori:doi:10.1140/epja/i2019-12889-8. First online November 14, 2019. [inspire]
  26. Axial Vector Form Factors from Lattice QCD that satisfy PCAC Relation (Yong-Chull Jang, Rajan Gupta, Boram Yoon, and Tanmoy Bhattacharya), Los Alamos report LA-UR-19-29302; ori:oai:arXiv.org:1905.06470 [hep-lat] Physical Review Letters 124:07 (2019) 072002; ori:doi:10.1103/PhysRevLett.124.072002 Published February 19, 2020. pmid:32142334; [inspire].
  27. AI Meets Exascale Computing: Advancing Cancer Research with Large-Scale High Performance Computing (Tanmoy Bhattacharya, Thomas Brettin, James H. Doroshow, Yvonne A. Evrard, Emily J. Greenspan, Amy L. Gryshuk, Thuc T. Hoang, Carolyn B. Vea Lauzon, Dwight Nissley, Lynne Penberthy, Eric Stahlberg, Rick Stevens, Fred Streitz, Georgia Tourassi, Fangfang Xia, and George Zaki) Los Alamos report LA-UR-19-24131; Frontiers in Oncology 9 (2019) 984; ori:doi:10.3389/fonc.2019.00984; pmid:31632915; PMC6783509. Published October 2, 2019.
  28. Estimating the timing of early simian-human immunodeficiency virus infections: a comparison between Poisson Fitter and BEAST (Elena E. Giorgi, Hui Li, Tanmoy Bhattacharya, George M. Shaw, and Bette Korber) Los Alamos report LA-UR-19-26789; mBio 11:2 (Mar/Apr 2020) e00324-20; ori:doi:10.1128/mBio.00324-20 pmid:32209678; PMC7157514. Published March 24, 2020.
  29. On Mixup Training: Improved Calibration and Predictive Uncertainty for Deep Neural Networks (Sunil Thulasidasan, Gopinath Chennupati, Jeff A. Bilmes, Tanmoy Bhattacharya, Sarah Michalak) ori:oai:arXiv.org:1905.11001 [stat.ML] 36th International Conference on Machine Learning (Workshop on Uncertainty Quantification and Robustness in Deep Learning), Long Beach, California, USA 11–13 June, 2019 UDL-2019-paper-43. and 33rd Conference on Neural Information Processing Systems, Vancouver, Canada 10–12 December, 2019. Advances in Neural Information Processing Systems 32 (2019) 13888–13899.
  30. Combating Label Noise in Deep Learning using Abstention (Sunil Thulasidasan, Tanmoy Bhattacharya, Jeff Bilmes, Gopinath Chennupati, and Jamal Mohd-Yusof) ori:oai:arXiv.org:1905.10964 [stat.ML] 36th International Conference on Machine Learning, Long Beach, California, USA 11–13 June, 2019. Paper ID 3320. Proceedings of Machine Learning Research 97 (2019) 6234–6243.
  31. CAT: Computer Aided Triage Improving upon the Bayes Risk through ε-refusal triage rules (Nicolas Hengartner, Leticia Cuellar, Xiao-Cheng Wu, Georgia Tourassi, John Qiu, Blair Christian, and Tanmoy Bhattacharya) BMC Bioinformtics 19:Suppl 18 (2018) 485; ori:doi:10.1186/s12859-018-2503-9; pmid:30577756; PMC6302364. Published December 21, 2018.
  32. The need for uncertainty quantification in machine-assisted medical decision making (Edmon Begoli, Tanmoy Bhattacharya, and Dimitri Kusnezov) Los Alamos report LA-UR-18-28661 Nature Machine Intelligence 1:1 (2019) 20–23; ori:doi:10.1038/s42256-018-0004-1 Published on January 7, 2019.
  33. Machine Learning Estimators for Lattice QCD Observables (Boram Yoon, Tanmoy Bhattacharya, and Rajan Gupta) Los Alamos report LA-UR-18-26411 ori:oai:arXiv.org:1807.05971 [hep-lat] Physical Review D100:1 (2019) 014504; ori:doi:10.1103/PhysRevD.100.014504 Published July 9, 2019. [inspire].
  34. Flavor diagonal tensor charges of the nucleon from 2+1+1 flavor lattice QCD (Rajan Gupta, Boram Yoon, Tanmoy Bhattacharya, Vincenzo Cirigliano, Yong-Chull Jang, and Huey-Wen Lin (Precision Neutron Decay Matrix Element (PNDME) Collaboration)) Los Alamos report LA-UR-18-28007; MSU publication MSUHEP-18-016; ori:oai:arXiv.org:1808.07597 [hep-lat] Physical Review D98:9 (2018) 091501(R); ori:doi:10.1103/PhysRevD.98.091501 Published November 12, 2018. [inspire].
  35. Nucleon Electromagnetic Form Factors in the Continuum Limit from (2+1+1)-flavor Lattice QCD (Yong-Chull Jang, Rajan Gupta, Huey-Wen Lin, Boram Yoon, and Tanmoy Bhattacharya (Precision Neutron Decay Matrix Element (PNDME) Collaboration)) Los Alamos report LA-UR-19-25275; MSU publication MSUHEP-19-006; ori:oai:arXiv.org:1906.07217 [hep-lat] Physical Review D101:01 (2020) 014507; ori:doi:10.1103/PhysRevD.101.014507 Published January 23, 2020. [inspire].
  36. Intragenomic Conflict over Bet-Hedging (Jon G. Wilkins and Tanmoy Bhattacharya) Los Alamos report LA-UR-18-25754; bioRxiv 364190 ori:doi:10.1101/364190 Philosophical Transactions B 374:1766 (2019) 20180142; ori:doi:10.1098/rstb.2018.0142; pmid:30966914; PMC6335451. Published December 31, 2018.
  37. Isovector Charges of the Nucleon from 2+1+1-flavor Lattice QCD (Rajan Gupta, Yong-Chull Jang, Boram Yoon, Huey-Wen Lin, Vincenzo Cirigliano, and Tanmoy Bhattacharya (Precision Neutron Decay Matrix Element (PNDME) Collaboration)) Los Alamos report LA-UR-18-25535; MSU publication MSUHEP-18-011; ori:oai:arXiv.org:1806.09006 [hep-lat] Physical Review D98:03 (2018) 034503; ori:doi:10.1103/PhysRevD.98.034503 Published 17 August 2018. [inspire].
  38. Quark contribution to the proton spin from 2+1+1-flavor lattice QCD (Huey-Wen Lin, Rajan Gupta, Boram Yoon, Yong-Chull Jang, and Tanmoy Bhattacharya (Precision Neutron Decay Matrix Element (PNDME) Collaboration)) Los Alamos report LA-UR-18-25337; MSU publication MSUHEP-18-010; ori:oai:arXiv.org:1806.10604 [hep-lat] Physical Review D98:9 (2018) 094512; ori:doi:10.1103/PhysRevD.98.094512 Published November 30, 2018. [inspire].
  39. Accumulated mutations by 6 months of infection collectively render transmitted/founder HIV-1 significantly less fit or Accumulated mutations cause significant fitness losses and are associated with decreased viral loads during early HIV-1 infection. (Chu Wang, Donglai Liu, Tao Zuo, Bhavna Hora, Fangping Cai, Haitao Ding, John Kappes, Christina Ochsenbauer, Wei Kong, Xianghui Yu, Tanmoy Bhattacharya, Alan S. Perelson, and Feng Gao) Los Alamos report LA-UR-19-30331 October 2019. Journal of Infection 80:2 (2020) 210–218; ori:doi:10.2139/ssrn.3318932; ori:doi:10.1016/j.jinf.2019.12.001; pmid:31812703; PMC7010540. Published online Dec 5, 2019.
  40. Superinfection and Cure of Infected Cells as Novel Mechanisms for Hepatitis C Virus Adaptation and Persistence (Ruian Ke, Hui Li, Shuyi Wang, Wenge Ding, Ruy M. Ribeiro, Elena E. Giorgi, Tanmoy Bhattacharya, Richard J.O. Barnard, Beatrice H. Hahn, George M. Shaw, and Alan S. Perelson) Los Alamos report LA-UR-17-26176 Jul 2017. Proceedings of National Academy of Sciences 115:30 (July 24, 2018) E7139–E7148; ori:doi:10.1073/pnas.1805267115; pmid:29987026; PMC6065014. Published ahead of print on 9 July 2018
  41. Kinship structures create persistent channels for language transmission (J. Stephen Lansing, Cheryl Delos Santos Abundo, Guy S. Jacobs, Elsa G. Guillot, Stefan Thurner, Sean S. Downey, Lock Yue Chew, Tanmoy Bhattacharya, Ning Ning Chung, Herawati Sudoyo, and Murray P. Cox) Los Alamos report LA-UR-17-23693 May 2017. Proceedings of the National Academy of Sciences 114:49 (2017) 12910–12915; ori:doi:10.1073/pnas.1706416114; Published ahead of print November 20, 2017. pmid: 29158378; PMC5724253.
  42. A strongly selected mutation in the HIV-1 genome is independent of adaptive immune responses. (Donglai Liu, Chu Wang, Bhavna Hora, Tao Zuo, Nilu Goonetilleke, Michael K.P. Liu, Mark Berrong, Guido Ferrari, Andrew J. McMichael, Tanmoy Bhattacharya, Alan S. Perelson, and Feng Gao) Los Alamos report LA-UR-17-21998 March 2017. Retrovirology 14:1 (2017) 46; ori:doi:10.1186/s12977-017-0371-4; pmid: 29017536; PMC5634943. Published Oct 10, 2017.
  43. Axial-vector Form Factors of the Nucleon from Lattice QCD (Rajan Gupta, Yong-Chull Jang, Huey-Wen Lin, Boram Yoon, and Tanmoy Bhattacharya (Precision Neutron Decay Matrix Element (PNDME) Collaboration)) Los Alamos report LA-UR-17-23678; ori:oai:arXiv.org:1705.06834 [hep-lat] Physical Review D96:11 (2017) 114503; ori:doi:10.1103/PhysRevD.96.114503 Published December 4, 2017. [inspire].
  44. Nucleon transverse momentum-dependent parton distributions in lattice QCD: Renormalization patterns and discretization effects (Boram Yoon, Michael Engelhardt, Rajan Gupta, Tanmoy Bhattacharya, Jeremy R. Green, Bernard U. Munsch, John W. Negele, Andrew V. Pochinsky, Andreas Schäfer, and Sergey N. Syritsin) Los Alamos report LA-UR-17-24472. ori:oai:arXiv.org:1706.03406 [hep-lat] Physical Review D96:09 (2017) 094508; ori:doi:10.1103/PhysRevD.96.094508 Published Nov 21, 2017. [inspire].
  45. Transmission of multiple HIV-1 transmitted/founder viruses into the same recipients was not determined by modest phenotypic differences. or Disparate phenotypic properties of multiple transmitted/founder viruses in the same HIV-1-infected individuals (Hongshuo Song, Bhavna Hora, Elena E. Giorgi, Amit Kumar, Fangping Cai, Tanmoy Bhattacharya, Alan Perelson, and Feng Gao) Scientific Reports 6 (2016) 38130; ori:doi:10.1038/srep38130 pmid: 27909304; PMC5133561. Published online Dec 02, 2016.
  46. Worldline approach for numerical computation of electromagnetic Casimir energies. I. Scalar field coupled to magnetodielectric media (Jonathan B. Mackory, Tanmoy Bhattacharya and Daniel A. Steck) Los Alamos report LA-UR-16-24039, June 2016. ori:oai:arXiv.org:1606.00150 [quant-ph] Physical Review A94:4 (2016) 042508; ori:doi:10.1103/PhysRevA.94.042508 Published October 12, 2016. [inspire].
  47. Isovector charges of the nucleon from 2+1-flavor QCD with clover fermions (Boram Yoon, Yong-Chull Jang, Rajan Gupta, Tanmoy Bhattacharya, Jeremy Green, Bálint Joó, Huey-Wen Lin, Kostas Orginos, David Richards, Sergey Syritsyn, and Frank Winter (Nucleon Matrix Element (NME) Collaboration)) Los Alamos report LA-UR-16-20523. ori:oai:arXiv.org:1611.07452 [hep-lat] Physical Review D95:7 (2017) 074508; ori:doi:10.1103/PhysRevD.95.074508 Published Apr 13, 2017. [inspire].
  48. Controlling Excited State Contamination in Nucleon Matrix Elements (Boram Yoon, Rajan Gupta, Tanmoy Bhattacharya, Michael Engelhardt, Jeremy Green, Bálint Joó, Huey-Wen Lin, John Negele, Kostas Orginos, Andrew Pochinsky, David Richards, Sergey Syritsyn, and Frank Winter (Nucleon Matrix Element (NME) Collaboration)) Los Alamos report LA-UR-16-20524. ori:oai:arXiv.org:1602.07737 [hep-lat] Physical Review D93:11 (2016) 114506; ori:doi:10.1103/PhysRevD.93.114506 Published June 8, 2016. [inspire].
  49. Axial, Scalar and Tensor Charges of the Nucleon from 2+1+1-flavor Lattice QCD (Tanmoy Bhattacharya, Vincenzo Cirigliano, Saul D. Cohen, Rajan Gupta, Huey-Wen Lin, and Boram Yoon (Precision Neutron Decay Matrix Element (PNDME) Collaboration)) Los Alamos report LA-UR-16-20522, LA-UR-15-28922; Institute for Nuclear Theory report INT-PUB-16-008, ori:oai:arXiv.org:1606.07049 [hep-lat] Physical Review D94:5 (2016) 054508; ori:doi:10.1103/PhysRevD.94.054508 Published September 19, 2016. [inspire].
  50. Tracking HIV-1 recombination to resolve its contribution to HIV-1 evolution in natural infection (Hongshuo Song, Elena E. Giorgi, Vitaly V. Ganusov, Fangping Cai, Gayathri Athreya, Hyejin Yoon, Oana Carja, Bhavna Hora, Peter Hraber, Ethan Romero-Severson, Chunlai Jiang, Xiaojun Li, Shuyi Wang, Hui Li, Jesus F. Salazar-Gonzalez, Maria G. Salazar, Nilu Goonetilleke, Brandon F. Keele, David C. Montefiori, Myron S. Cohen, George M. Shaw, Beatrice H. Hahn, Andrew J. McMichael, Barton F. Haynes, Bette Korber, Tanmoy Bhattacharya, and Feng Gao) subsumes Role of Recombination in HIV-1 infection. (Hongshuo Song, Vitaly V. Ganusov, Fangping Cai, Bhavna Hora, Peter Hraber, Chunlai Jiang, Shuyi Wang, Hui Li, Jesus F. Salazar-Gonzalez, Maria G. Salazar, Nilu Goonetilleke, Tanmoy Bhattacharya, Elena E. Giorgi, Brandon Keele, David C. Montefiori, Myron S. Cohen, Bette T. Korber, George M. Shaw, Beatrice H. Hahn, Andrew J. McMahon, Barton F. Haynes, Feng Gao) and RAP: a new tool to detect recombination in longitudinal low-diversity HIV-1 samples (E.E. Giorgi, T. Bhattacharya, H. Song, F. Gao, G. Athreya, H. Yoon, O. Carja, B. Korber) Nature Communications 9:1 (2018) 1928; ori:doi:10.1038/s41467-018-04217-5. pmid: 29765018; PMC5954121. Published 15 May, 2018.
  51. Optimal Combination of Broadly Neutralizing Antibodies for Prevention and Treatment of HIV-1 Clade C Infection. (Ksitij Wagh, Tanmoy Bhattacharya, Carolyn Williamson, Alex Robles, Madeleine Bayne, Jetta Garrity, Michael Rist, Cecilia Rademeyer, Hyejin Yoon, Alan Lapedes, Hongmei Gao, Kelli Greene, Mark K. Louder, Rui Kong, Salim Abdool Karim, Dennis R. Burton, Dan H. Barouch, Michael C. Nussenzweig, John R. Mascola, Lynn Morris, David C. Montefiori, Bette Korber, Michael S. Seaman) Public Library of Science Pathogens 12:3 (2016) e1005520; ori:doi:10.1371/journal.ppat.1005520. pmid: 27028935; PMC4814126. Published March 30, 2016.
  52. Neutron Electric Dipole Moment and Tensor Charges from Lattice QCD (Tanmoy Bhattacharya, Vincenzo Cirigliano, Rajan Gupta, Huey-Wen Lin, and Boram Yoon (PNDME Collaboration)) Los Alamos report LA-UR-15-24210. ori:oai:arXiv.org:1506.04196 [hep-lat] Physical Review Letters 115:21 (2015) 212002; ori:doi:10.1103/PhysRevLett.115.212002; pmid:26636847; Published November 17, 2015. [inspire].
  53. Single-Genome Sequencing of Hepatitis C Virus in Donor-Recipient Pairs Distinguishes Modes and Models of Virus Transmission and Early Diversification. (Hui Li, Mark B. Stoddard, Shuyi Wang, Elena E. Giorgi, Lily M. Blair, Gerald H. Learn, Beatrice H. Hahn, Harvey J. Alter, Michael P. Busch, Daniel S. Fierer, Ruy M. Ribeiro, Alan S. Perelson, Tanmoy Bhattacharya, and George M. Shaw) Journal of Virology 90:1 (January 2016) 152–166. ori:doi:10.1128/JVI.02156-15; pmid: 26468546; PMC4702571. Published ahead of print October 14, 2015.
  54. Longitudinal Antigenic Sequences and Sites from Intra-Host Evolution (LASSIE) Identifies Immune-Selected HIV Variants. (Peter Hraber, Bette Korber, Ksitij Wagh, Elena E. Giorgi, Tanmoy Bhattacharya, S. Gnanakaran, Alan S. Lapedes, Gerald H. Learn, Edward F. Kreider, Yingying Li, George M. Shaw, Beatrice H. Hahn, David C. Montefiori, S. Munir Alam, Mattia Bonsignori, M. Anthony Moody, Hua-Xian Liao, Feng Gao, and Barton F. Haynes) ori:oai:arXiv.org:1508.00463 [q-bio.PE] Viruses 7:10 (2015) 5443–5475; pmid: 26506369; PMC4632389. ori:doi:10.3390/v7102881 Published October 21, 2015.
  55. Isovector and Isoscalar Tensor Charges of the Nucleon from Lattice QCD (Tanmoy Bhattacharya, Vincenzo Cirigliano, Saul D. Cohen, Rajan Gupta, Anosh Joseph, Huey-Wen Lin, and Boram Yoon (Precision Neutron Decay Matrix Elements (PNDME) Collaboration)) Los Alamos report LA-UR-15-23801. ori:oai:arXiv.org:1506.06411 [hep-lat] Physical Review D92:09 (2015) 094511; ori:doi:10.1103/PhysRevD.92.094511 Published November 10, 2015. [inspire].
  56. Studying Language Evolution in the Age of Big Data (Tanmoy Bhattacharya, Nancy Retzlaff, Damián E. Blasi, William Croft, Michael Cysouw, Daniel Hruschka, Ian Maddieson, Lydia Müller, Eric Smith, Peter F. Stadler, George Starostin, and Hyejin Youn) Los Alamos report LA-UR-18-24872. Journal of Language Evolution 3:2 (1 July 2018) 94–129; ori:doi:10.1093/jole/lzy004 Published ahead of print June 8, 2018.
  57. The Emergence of Life as a First Order Phase Transition (Cole Mathis, Tanmoy Bhattacharya, Sara Imari Walker) Los Alamos report LA-UR-15-21595. ori:oai:arXiv.org:1503.02776 [nlin.AO] Astrobiology 17:3 (March 2017) 266–276; ori:doi:10.1089/ast.2016.1481; pmid:28323481; Published Mar 22, 2017.
  58. Dimension-5 CP-odd operators: QCD mixing and renormalization (Tanmoy Bhattacharya, Vincenzo Cirigliano, Rajan Gupta, Emanuele Mereghetti, and Boram Yoon) Los Alamos report LA-UR-15-21109. ori:oai:arXiv.org:1502.07325 [hep-ph] Physical Review D92:11 (2015) 114026; ori:doi:10.1103/PhysRevD.92.114026 Published December 23, 2015. [inspire].
  59. A Likelihood Ratio Anomaly Detector for Identifying Within-Perimeter Computer Network Attacks. (Justin Grana, David Wolpert, Joshua Neil, Dongping Xie, Tanmoy Bhattacharya, Russel Bent) Los Alamos report LA-UR-16-22440, Apr 2016. Journal of Network and Computer Applications 66 (May 2016) 166–179; ori:doi:10.1016/j.jnca.2016.03.008; Available online Mar 11, 2016.
    subsumes
    HMMs for Optimal Detection of Computer Network Attacks. (Justin Grana, David Wolpert, Joshua Neil, Dongping Xie, Tanmoy Bhattacharya) Los Alamos report LA-UR-14-24747, Jul 2014. Santa Fe working paper 2014-06-022, Jun 26 2014.
  60. Preexisting compensatory amino acids compromise fitness costs of a HIV-1 T cell escape mutations. (Donglai Liu, Tao Zuo, Bhavna Hora, Hongshuo Song, Wei Kong, Xianghui Yu, Nilu Goonetilleke, Tanmoy Bhattacharya, Alan S. Perelson, Barton F. Haynes, Andrew McMichael, and Feng Gao) Los Alamos report LA-UR-14-24449 July 2013. Retrovirology 11:1 (2014) 101; ori:doi:10.1186/s12977-014-0101-0; pmid: 25407514; PMC4264250. Published Nov 19, 2014.
  61. Impact of clade, geography and age of epidemic on HIV-1 neutralization by antibodies (Peter Hraber, Bette T. Korber, Alan S. Lapedes, Robert T. Bailer, Michael S. Seaman, Hongmei Gao, Kelli M. Greene, Francine McCutchan, Carolyn Williamson, Jerome H. Kim, Sodsai Tovanabutra, Beatrice H. Hahn, Ronald Swanstrom, Michael M. Thompson, Feng Gao, Linda Harris, Elena Giorgi, Nicholas Hengartner, Tanmoy Bhattacharya, John R. Mascola, David C. Montefiori) Journal of Virology 88:21 (Nov 2014). 12623–12643 ori:doi:10.1128/JVI.01705-14; pmid: 25142591; PMC4248897. Published ahead of print August 20, 2014.
  62. Equation of state in (2+1)-flavor QCD. (A. Bazavov, Tanmoy Bhattacharya, C. DeTar, H.-T. Ding, Steven Gottlieb, Rajan Gupta, P. Hegde, U.M. Heller, F. Karsch, E. Laermann, L. Levkova, Swagato Mukherjee, P. Petreczky, C. Schmidt, C. Schroeder, R.A. Soltz, W. Soeldner, R. Sugar, M. Wagner, and P. Vranas (HotQCD Collaboration)) Los Alamos report LA-UR-14-25672. ori:oai:arXiv.org:1407.6387 [hep-lat] Physical Review D90:09 (2014) 094503; ori:doi:10.1103/PhysRevD.90.094503 Published Nov 4, 2014. [inspire].
  63. The QCD phase transition with physical-mass, chiral quarks. (Tanmoy Bhattacharya, Michael I. Buchoff, Norman H. Christ, H.-T. Ding, Rajan Gupta, Chulwoo Jung, F. Karsch, Zhongjie Lin, R.D. Mawhinney, Greg McGlynn, Swagato Mukherjee, David Murphy, P. Petreczky, Dwight Renfrew, Chris Schroeder, R.A. Soltz, P.M. Vranas, and Hantao Yin (HotQCD Collaboration)) Brookhaven preprint BNL-103837-2014-JA, Columbia University preprint CU-TP-1205, INT preprint INT-PUB-14-003, Los Alamos report LA-UR-14-21066, and Livermore preprint LLNL-JRNL-650194. ori:oai:arXiv.org:1402.5175 [hep-lat] Physical Review Letters 113:08 (2014) 082001; ori:doi:10.1103/PhysRevLett.113.082001; pmid:25192088; Published Aug 18, 2014. [inspire].
  64. Reversion and T cell escape mutations compensate the fitness loss of a CD8+T cell escape mutant in their cognate transmitted/founder virus. (Hongshuo Song, Bhavna Hora, Tanmoy Bhattacharya, Nilu Goonetilleke, Michael K.P. Liu, Kevin Wiehe, Hui Li, Shilpa S. Iyer, Andrew J. McMichael, Alan S. Perelson, Feng Gao) Public Library of Science One 9:7 (2014) e102734; ori:doi:10.1371/journal.pone.0102734; pmid: 25028937; PMC4100905. Published online Jul 16, 2014.
  65. Evolutionary dynamics and information hierarchies in biological systems. (Sara Imari Walker, Benjamin J. Callahan, Gaurav Arya, J. David Barry, Tanmoy Bhattacharya, Sergei Grigoryev, Matteo Pellegrini, Karsten Rippe, Susan M. Rosenberg) Annals of the New York Academy of Sciences, 1305:Annals Reports (December 2013) 1–17; ori:doi:10.1111/nyas.12140; pmid: 23691975. First published online May 20, 2013.
  66. Nucleon Charges and Electromagnetic Form Factors from 2+1+1-Flavor Lattice QCD. (Tanmoy Bhattacharya, Saul D. Cohen, Rajan Gupta, Anosh Joseph, Huey-Wen Lin, and Boram Yoon) Los Alamos report LA-UR-13-24606, University of Washington preprint NT@UW-13-23, ori:oai:arXiv.org:1306.5435 [hep-lat] Physical Review D89:9 (2014) 094502; ori:doi:10.1103/PhysRevD.89.094502 Published May 6, 2014. [inspire].
  67. Detecting regular sound changes in linguistics as an example of concerted evolution. (Daniel J. Hruschka, Simon Branford, Eric D. Smith, Jon Wilkins, Andrew Meade, Mark Pagel, and Tanmoy Bhattacharya) Los Alamos report LA-UR-14-29463, Dec 2014. Current Biology 25:1 (2015) 1–9; ori:doi:10.1016/j.cub.2014.10.064; pmid: 25532895; PMC4291143 Published online Dec 18, 2014.
  68. Molecular Mechanisms of HIV Type 1 Prophylaxis Failure Revealed by Single-Genome Sequencing. (Hui Li, Lily Blair, Yalu Chen, Gerald Learn, Katja Pfafferott, Mina John, Tanmoy Bhattacharya, Beatrice H Hahn, Simon Mallal, George M Shaw, and Katherine J Bar) The Journal of Infectious Diseases 208:10 (2013) 1598–1603; ori:doi:10.1093/infdis/jit485; pmid: 24023257. PMC3805246; Published online Sep 9, 2013.
  69. Human APOBEC3 Induced Mutation of Human Immunodeficiency Virus Type-1 Contributes to Adaptation and Evolution in Natural Infection. (Eun-Young Kim, Ramon Lorenzo-Redondo, Susan J. Little, Yoon-Seok Chung, Prabhjeet K. Phalora, Irina Maliijkovic Berry, John P. Archer, Sudhir Penugonda, Will Fischer, Douglas D. Richman, Tanmoy Bhattacharya, Michael H. Malim, and Steven M. Wolinsky) Los Alamos report LA-UR-14-25673 Public Library of Science Pathogens 10:7 (2014) e1004281; ori:doi:10.1371/journal.ppat.1004281. pmid:25080100; PMC4117599 Published online Jul 31, 2014.
  70. Modeling sequence evolution in HIV-1 infection with recombination. (Elena E. Giorgi, Bette T. Korber, Alan S. Perelson, and Tanmoy Bhattacharya), Los Alamos report LA-UR-12-24298, Sep 2012. Journal of Theoretical Biology 329 (21 July 2013) 82–93; ori:doi:10.1016/j.jtbi.2013.03.026; pmid: 23567647; PMC3667750; NIHMS465784. Published online Apr 6, 2013.
  71. Quantifying the Diversification of Hepatitis C Virus (HCV) During Primary Infection: Estimates of the In Vivo Mutation Rate. (Ruy M. Ribeiro, Hui Li, Shuyi Wang, Mark B. Stoddard, Gerald H. Learn, Bette T. Korber, Tanmoy Bhattacharya, Jeremie Guedj, Erica H. Parrish, Beatrice H. Hahn, George M. Shaw, and Alan S. Perelson), Los Alamos report LA-UR-12-20157, 22 Mar 2012. Public Library of Science Pathogens 8:8 (2012) e1002881; ori:doi:10.1371/journal.ppat.1002881; pmid: 22927817; PMC3426522. Published online Aug 23, 2012.
  72. Elucidation of Hepatitis C Virus Transmission and Early Diversification by Single Genome Sequencing. (Hui Li, Mark B. Stoddard, Shuyi Wang, Lily M. Blair, Elena E. Giorgi, Erica H. Parrish, Gerald H. Learn, Peter Hraber, Paul A. Goepfert, Michael S. Saag, Thomas N. Denny, Barton F. Haynes, Beatrice H. Hahn, Ruy M. Ribeiro, Alan S. Perelson, Bette T. Korber, Tanmoy Bhattacharya, and George M. Shaw), Los Alamos report LA-UR-12-20288, Mar 2012. Public Library of Science Pathogens 8:8 (2012) e1002880; ori:doi:10.1371/journal.ppat.1002880; pmid: 22927816; PMC3426529. Published online Aug 23, 2012.
  73. Impact of immune escape mutations on HIV-1 fitness in the context of the cognate transmitted/founder genome. (Hongshuo Song, Jeffrey W. Pavlichek, Fangping Cai, Tanmoy Bhattacharya, Hui Li, Shilpa S. Iyer, Katharine J. Bar, Julie M. Decker, Nilu Goonetilleke, Michael K.P. Liu, Anna Berg, Bhavna Hora, Mark S. Drinker, Josh Eudailey, Joy Pickeral, M. Anthony Moody, Guido Ferrari, Andrew McMichael, Alan S. Perelson, George M. Shaw, Beatrice H. Hahn, Barton F. Haynes, and Feng Gao), Retrovirology 9:10 (2012) 89; ori:doi:10.1186/1742-4690-9-89; pmid: 23110705; PMC3496648. Published online Oct 30, 2012.
  74. On the universal structure of human lexical semantics. (Hyejin Youn, Logan Sutton, Eric Smith, Cristopher Moore, Jon Wilkins, Ian Maddieson, William Croft, and Tanmoy Bhattacharya) Los Alamos report LA-UR-15-23327, May 2015. Santa Fe working paper 2015-04-013, Apr 29 2015. ori:oai:arXiv.org:1504.07843 [physics.soc-ph] Proceedings of the National Academy of Sciences 113:7 (2016) 1766–1771; Published ahead of print February 1, 2016. ori:doi:10.1073/pnas.1520752113; pmid: 26831113; PMC4763760.
  75. Chiral transition and U(1)A symmetry restoration from lattice QCD using Domain Wall Fermions. (A. Bazavov, Tanmoy Bhattacharya, Michael I. Buchoff, Michael Cheng, N.H. Christ, H.-T. Ding, Rajan Gupta, Prasad Hegde, Chulwoo Jung, F. Karsch, Zhongjie Lin, R.D. Mawhinney, Swagato Mukherjee, P. Petreczky, R.A. Soltz, P.M. Vranas, and Hantao Yin (HotQCD Collaboration)) Columbia University preprint CU-TP-1200, Brookhaven preprint BNL-97301-2012-JA, Los Alamos report LA-UR-12-21329, Livermore preprint LLNL-JRNL-557574. ori:oai:arXiv.org:1205.3535 [hep-lat] Physical Review D86:9 (2012) 094503; ori:doi:10.1103/PhysRevD.86.094503 Published Nov 6, 2012. [inspire].
  76. Fluctuations and Correlations of net baryon number, electric charge, and strangeness: A comparison of lattice QCD results with the hadron resonance gas model. (A. Bazavov, Tanmoy Bhattacharya, C.E. DeTar, H.-T. Ding, Steven Gottlieb, Rajan Gupta, P. Hegde, Urs M. Heller, F. Karsch, E. Laermann, L. Levkova, Swagato Mukherjee, P. Petreczky, Christian Schmidt, R.A. Soltz, W. Soeldner, R. Sugar, and Pavlos M. Vranas (HotQCD Collaboration)) ori:oai:arXiv.org:1203.0784 [hep-lat] Physical Review D86:3 (2012) 034509; ori:doi:10.1103/PhysRevD.86.034509 Published Aug 31, 2012 [inspire].
  77. Probing Novel Scalar and Tensor Interactions from (Ultra)Cold Neutrons to the LHC. (Tanmoy Bhattacharya, Vincenzo Cirigliano, Saul D. Cohen, Alberto Filipuzzi, Martín González-Alonso, Michael L. Graesser, Rajan Gupta, Huey-Wen Lin) Los Alamos report LA-UR-11-11460, Septemper 2011. University of Washington preprint NT@UW-11-16, Universitat de València preprint IFIC/11-57 and FTUV/11-1007, University of Wisconsin-Madison preprint NPAC-11-14, ori:oai:arXiv.org:1110.6448 [hep-ph] Physical Review D85:5 (2012) 054512; ori:doi:10.1103/PhysRevD.85.054512. Published Mar 30, 2012. [inspire].
  78. Chiral and deconfinement aspects of the QCD transition (A. Bazavov, T. Bhattacharya, M. Cheng, C. DeTar, H.-T. Ding, Steven Gottlieb, R. Gupta, P. Hegde, U.M. Heller, F. Karsch, E. Laermann, L. Levkova, S. Mukherjee, P. Petreczky, C. Schmidt, R.A. Soltz, W. Soeldner, R. Sugar, D. Toussaint, W. Unger, and P. Vranas (HotQCD Collaboration)) BNL report BNL-96539-2011-JA, LANL report LA-UR-11928. ori:oai:arXiv.org:1111.1710 [hep-lat] Physical Review D85:5 (2012) 054503; ori:doi:10.1103/PhysRevD.85.054503. Published Mar 5, 2012. [inspire].
  79. Greenbergian universals, diachrony and statistical analysis (William Croft, Tanmoy Bhattacharya, Dave Kleinschmidt, D. Eric Smith, T. Florian Jaeger), Los Alamos report LA-UR-11-03658, June 2011. Linguistic Typology 15:2 (2011) 433–453 ori:doi:10.1515/LITY.2011.029. Published online Nov 22, 2011.
  80. Geographical distribution of phonological complexity (Ian Maddieson, Tanmoy Bhattacharya, Eric Smith, William Croft), Los Alamos report LA-UR-11-03659, June 2011. Linguistic Typology 15:2 (2011) 267–269 ori:doi:10.1515/LITY.2011.020. Published online Nov 22, 2011.
  81. A Note on Two-sample Tests for Comparing Intra-individual Genetic Sequence Diversity between Populations (EE Giorgi and T Bhattacharya) Los Alamos report LA-UR-11-10065. Biometrics 68:4 (2012) 1323–1326 ori:doi:10.1111/j.1541-0420.2012.01775.x; pmid: 23004569; PMC3652673; NIHMS454001. Published online Sep 24, 2012.
  82. Role of Donor Genital Tract HIV-1 Diversity in the Transmission Bottleneck (Debrah I. Boeras, Peter T. Hraber, Mackenzie Hurlston, Tammy Evans-Strickfaden, Tanmoy Bhattacharya, Elena E. Giorgi, Joseph Mulenga, Etienne Karita, Bette T. Korber, Susan Allen, Clyde E. Hart, Cynthia A. Derdeyn and Eric Hunter) Los Alamos report LA-UR-11-11256. Proceedings of the National Academy of Sciences 108:46 (2011) E1156–E1163 ori:doi:10.1073/pnas.1103764108; pmid: 22065783; PMC3219102. Published online Nov 7, 2011.
  83. Recurrent Signature Patterns in HIV-1 B Clade Envelope Glycoproteins Associated with either Early or Chronic Infection (S. Gnanakaran, Tanmoy Bhattacharya, Marcus Daniels, Brandon F. Keele, Peter T. Hraber, Alan S. Lapedes, Tongye Shen, Brian Gaschen, Mohan Krishnamoorthy, Hui Li, Julie M. Decker, Jesus F. Salazar-Gonzalez, Shuyi Wang, Chunlai Jiang, Feng Gao, Ronald Swanstrom, Jeffrey A. Anderson, Li-Hua Ping, Myron S. Cohen, Martin Markowitz, Paul A. Goepfert, Michael S. Saag, Joseph J. Eron, Charles B. Hicks, William A. Blattner, Georgia D. Tomaras, Mohammed Ashmal, Norman L. Letvin, Peter B. Gilbert, Allan C. DeCamp, Craig A. Magaret, William R. Schief, Yih-En Andrew Ban, Ming Zhang, Kelly A. Soderberg, Joseph G. Sodorsky, Barton F. Haynes, George M. Shaw, Beatrice H. Hahn and Bette Korber) Public Library of Science Pathogens 7:9 (2011) e1002209 ori:doi:10.1371/journal.ppat.1002209; pmid: 21980282; PMC3182927. Published online September 29, 2011.
  84. A Signature in HIV-1 Envelope Leader Peptide Associated with Transition from Acute to Chronic Infection Impacts Envelope Processing and Infectivity (Mohammed Asmal, Ina Hellmann, Weimin Liu, Brandon F. Keele, Alan S. Perelson, Tanmoy Bhattacharya, S. Gnanakaran, Marcus Daniels, Barton F. Haynes, Bette T. Korber, Beatrice H. Hahn, George M. Shaw and Norman L. Letvin) Public Library of Science One 6:8 (2011) e23673 ori:doi:10.1371/journal.pone.0023673; pmid: 21876761; PMC3158090. Published online August 18, 2011.
  85. Epitope-specific CD8+ T Lymphocytes Cross-recognize Mutant SIV Sequences but Fail to Contain Very Early Evolution and Eventual Fixation of Epitope Escape Mutations During SIV Infection. (Evan M. Cale, Peter Hraber, Elena E. Giorgi, Will Fisher, Tanmoy Bhattacharya, Thomas Leitner, Wendy W. Yeh, Cheryl Gleasner, Lance D. Green, Cliff S. Han, Bette Korber, and Norman L. Letvin) Journal of Virology 85:8 (2011) 3746–3757. ori:doi:10.1128/JVI.02420-10; pmid: 21307185; PMC3126128. Published ahead of print February 9, 2011.
  86. Genital tract sequestration of SIV following acute infection (James B. Whitney, Peter T. Hraber, Corinne Luedemann, Elena E. Giorgi, Marcus G. Daniels, Tanmoy Bhattacharya, Srinivas S. Rao, John R. Mascola, Gary J. Nabel, Bette T. Korber, and Norman L. Letvin) Public Library of Science Pathogens 7:2 (2011) e1001293 ori:doi:10.1371/journal.ppat.1001293; pmid: 21379569; PMC3040679. Published online February 17, 2011.
  87. Absence of Xenotropic Murine Leukemia Virus-Related Virus in Blood Cells of Men at Risk for and Infected with HIV (Kevin J. Kunstman, Tanmoy Bhattacharya, John Flaherty, John P. Phair, and Steven M. Wolinsky) Los Alamos report LA-UR-09-08117, December 2009. AIDS 24:11 (July 17, 2010) 1784–1785 ori:doi:10.1097/QAD.0b013e32833b76fb; pmid: 20597166. 2 citations as of Apr 13, 2011.
  88. Transmission of Single HIV-1 and Dynamics of Early Immune Escape Revealed by Ultra-deep Sequencing (Will Fischer, Vitaly V. Ganusov, Elena E. Giorgi, Peter T. Hraber, Brandon F. Keele, Thomas Leitner, Cliff S. Han, Cheryl D. Gleasner, Lance Green, Chien-Chi Lo, Ambarish Nag, Timothy C. Wallstrom, Shuyi Wang, Andrew J. McMichael, Barton F. Haynes, Beatrice H. Hahn, Alan S. Perelson, Persephone Borrow, George M. Shaw, Tanmoy Bhattacharya, and Bette Korber) Public Library of Science One 5:8 (2010) e12303 ori:doi:10.1371/journal.pone.0012303; pmid: 20808830; PMC2924888. Published online August 20, 2010. 3 citations as of Apr 13, 2011.
  89. High Multiplicity Infection by HIV-1 in Men Who Have Sex with Men (Hui Li, Katharine J. Bar, Shuyi Wang, Julie M. Decker, Yalu Chen, Chuanxi Sun, Jesus F. Salazar-Gonzalez, Maria G. Salazar, Gerald H. Learn, Charity J. Morgan, Joseph E. Schumacher, Peter Hraber, Elena E. Giorgi, Tanmoy Bhattacharya, Bette T. Korber, Alan S. Perelson, Joseph J. Eron, Myron S. Cohen, Charles B. Hicks, Barton F. Haynes, Martin Markowitz, Brandon F. Keele, Beatrice H. Hahn, and George M. Shaw) Public Library of Science Pathogens 6:5 (2010) e1000890. ori:doi:10.1371/journal.ppat.1000890; pmid: 20485520; PMC2869329. Published online May 13, 2010 8 citations as of Apr 13, 2011.
  90. Genetic signatures in the Envelope Glycoproteins of HIV-1 that Associate with Broadly Neutralizing Antibodies. (S. Gnanakaran, Marcus G. Daniels, Tanmoy Bhattacharya, Alan S. Lapedes, Anurag Sethi, Ming Li, Haili Tang, Kelli Greene, Hongmei Gao, Barton F. Haynes, Myron S. Cohen, George M. Shaw, Michael Seaman, Amit Kumar, Feng Gao, David C. Montefiori, and Bette Korber) Public Library of Science Computational Biology 6:10 (2010) e1000955 ori:doi:10.1371/journal.pcbi.1000955; pmid: 20949103; PMC2951345. Published online October 7, 2010. 1 citation as of Apr 13, 2011.
  91. Estimating time since infection in Early Homogeneous HIV-1 Samples using a Poisson Model (Elena E. Giorgi, Bob Funkhouser, Gayathri Athreya, Alan S. Perelson, Bette Korber, and Tanmoy Bhattacharya) Biomedcentral Bioinformatics 11 (2010) 532 ori:doi:10.1186/1471-2105-11-532; pmid: 20973976; PMC2975664. Published online October 25, 2010. 1 citation as of Apr 13, 2011.
  92. Tiered Categorization of a Diverse Panel of HIV-1 Env Pseudoviruses for Neutralizing Antibody Assessment (Michael S. Seaman, Holly Janes, Natalie Hawkins, Lauren E. Grandpre, Colleen Devoy, Ayush Giri, Rory T. Coffey, Linda Harris, Blake Wood, Marcus G. Daniels, Tanmoy Bhattacharya, Alan Lapedes, Victoria R. Polonis, Francine E. McCutchan, Peter B. Gilbert, Steve G. Self, Bette T. Korber, David C. Montefiori, and John R. Mascola) Journal of Virology 84:3 (2010) 1439–1452 ori:doi:10.1128/JVI.02108-09; pmid: 19939925; PMC2812321. Published online November 25, 2009. 14 citations as of Apr 13, 2011.
  93. Breadth of HIV-specific Neutralizing Activity in Sera: Clustering Analysis and Association with Clinical Variables (Nicole A. Doria-Rose, Rachel M. Klein, Marcus G. Daniels, Sijy O'Dell, Martha Nason, Alan Lapedes, Tanmoy Bhattacharya, Stephen A. Migueles, Richard T. Wyatt, Bette T. Korber, John R. Mascola, and Mark Connors), Journal of Virology 84:3 (2010) 1631–1636 ori:doi:10.1128/JVI.01482-09; pmid: 19923174; PMC2812355. Published online November 18, 2009. . 12 citations as of Apr 13, 2011
  94. Equation of state and QCD transition at finite temperature (A. Bazavov, T. Bhattacharya, M. Cheng, N.H. Christ, C. DeTar, S. Ejiri, Steven Gottlieb, R. Gupta, U.M. Heller, K. Huebner, C. Jung, F. Karsch, E. Laermann, L. Levkova, C. Miao, R.D. Mawhinney, P. Petreczky, C. Schmidt, R.A. Soltz, W. Soeldner, R. Sugar, D. Toussaint, P. Vranas) ori:oai:arXiv.org:0903.4379 [hep-lat] Physical Review D80:1 (2009) 014504; ori:doi:10.1103/PhysRevD.80.014504. Published Jul 17, 2009. [inspire].
  95. The First T Cell Response to Transmitted/Founder Virus Contributes to the Control of Acute Viremia in HIV-1 Infection (Nilu Goonetilleke, Michael K.P. Liu, Jesus F. Salazar-Gonzalez, Guido Ferrari, Elena Giorgi, Vitaly V. Ganusov, Brandon F. Keele, Gerald H. Learn, Emma L. Turnbull, Maria G. Salazar, Kent J. Weinhold, Stephen Moore, CHAVI Clinical Core B, Norman Letvin, Barton F. Haynes, Myron S. Cohen, Peter Hraber, Tanmoy Bhattacharya, Persephone Borrow, Alan S. Perelson, Beatrice H. Hahn, George M. Shaw, Bette T. Korber and Andrew J. McMichael) Journal of Experimental Medicine 206:6 (2009) 1253–1272 ori:doi:10.1084/jem.20090365; pmid: 19487423; PMC2715063. Published online June 1, 2009. 66 citations as of Apr 13, 2011.
  96. Low-dose rectal inoculation of rhesus macaques by SIVsmE660 or SIVmac251 recapitulates human mucosal infection by HIV-1 (Brandon F. Keele, Hui Li, Gerald H. Learn, Peter Hraber, Elena E. Giorgi, Truman Grayson, Chuanxi Sun, Yalu Chen, Wendy W. Yeh, Norman L. Letvin, John R. Mascola, Gary J. Nabel, Barton F. Haynes, Tanmoy Bhattacharya, Alan S. Perelson, Bette T. Korber, Beatrice H. Hahn and George M. Shaw) Los Alamos report LA-UR-08-08081, December 2008. Journal of Experimental Medicine 206:5 (2009) 1117–1134. ori:doi:10.1084/jem.20082831; pmid: 19414559; PMC2715022. Published online May 4, 2009. 39 citations as of Apr 13, 2011.
  97. The HLA-B/-C Haplotype Block Contains Major Determinants for Host Control of HIV (Elizabeth Trachtenberg, Tanmoy Bhattacharya, Martha Ladner, John Phair, Henry Erlich and Steven M. Wolinsky) Los Alamos report LA-UR 08-07875, December 2008. Genes and Immunity 10:8 (2009) 673–677; ori:doi:10.1038/gene.2009.58; pmid: 19693088; PMC2873233; NIHMS201076. Published online August 20, 2009. 4 citations as of Apr 13, 2011.
  98. Human APOBEC3G-mediated Editing can Promote HIV-1 Sequence Diversification and Accelerate Adaptation to Selective Pressure. (Eun-Young Kim, Tanmoy Bhattacharya, Kevin Kunstman, Peter Swantek, Fransje A. Koning, Michael H. Malim and Steven M. Wolinsky) Los Alamos report LA-UR 08-07876, December 2008. Journal of Virology 84:19 (2010) 10402–10405. ori:doi:10.1128/JVI.01223-10; pmid: 20660203; PMC2937764. Published ahead of print July 21, 2010 1 citation as of Apr 13, 2011.
  99. CCL3L1 and HIV/AIDS susceptibility (Tanmoy Bhattacharya, Jennifer Stanton, Eun-Young Kim, Kevin J. Kunstman, John P. Phair, Lisa P. Jacobson and Steven M. Wolinsky) Los Alamos report LA-UR-08-07711, December 2008. Nature Medicine 15:10 (October 2009) 1112–1115 ori:doi:10.1038/nm1009-1112; pmid: 19812561. Corrected online Nov 3, 2009. 11 citations as of Apr 13, 2011.
  100. HIV Evolution in Early Infection: Selection Pressures, Patterns of Insertions and Deletions and the impact of Apobec (Natasha Wood, Tanmoy Bhattacharya, Brandon F. Keele, Elena Giorgi, Michael Liu, Brian Gaschen, Marcus Daniels, Guido Ferrari, Barton F. Haynes, Andrew McMichael, George M. Shaw, Beatrice H. Hahn, Bette Korber and Cathal Seoighe) Los Alamos report LA-UR-08-00653, February 2008. Public Library of Science Pathogens 5:5 (2009) e1000414. ori:doi:10.1371/journal.ppat.1000414; pmid: 19424423; PMC2671846. Published online May 8, 2009 13 citations as of Apr 13, 2011.
  101. Highly Complex Neutralization Determinants on a Monophyletic Lineage of Newly Transmitted Subtype C Human Immunodeficiency Virus Type 1 Env Clones from India (Smita S. Julkarni, Alan Lapedes, Haili Tang, S. Gnanakaran, Marcus G. Daniels, Ming Zhang, Tanmoy Bhattacharya, Ming Li, Victoria R. Polonis, Francine E. McCutchan, Lynn Morris, Dennis Ellenberger, Salvatore T. Butera, Robert C. Bollinger, Bette T. Korber, Ramesh S. Paranjape, and David Charles Montefiori) Los Alamos report LA-UR-07-08163, December 2007. Virology 385:2 (2009) 505–520 ori:doi:10.1016/j.virol.2008.12.032; pmid: 19167740; PMC2677301; NIHMS103344. Published ahead of print January 23, 2009 18 citations as of Apr 13, 2011.
  102. Modeling Sequence Evolution in Acute HIV-1 Infection (Ha Youn Lee, Elena E. Giorgi, Brandon F. Keele, Brian K. Gaschen, Gayathri S. Athreya, Jesus F. Salazar-Gonzalez, Kimmy T. Pham, Paul A. Geopfert, J. Michael Kilby, Michael S. Saag, Eric L. Delwart, Michael P. Busch, Beatrice H. Hahn, George M. Shaw, Bette T. Korber, Tanmoy Bhattacharya and Alan S. Perelson) Los Alamos report LA-UR-08-03733, June 2008. Journal of Theoretical Biology 261:2 (2009) 341–360. ori:doi:10.1016/j.jtbi.2009.07.038; pmid: 19660475; PMC2760689; NIHMS142119. Available online August 4, 2009 (Corrigendum: Journal of Theoretical Biology 297:3 (2012) 187. ori:doi:10.1016/j.jtbi.2011.12.010. Available online December 22, 2011 ) 12 citations as of Apr 13, 2011.
  103. Quantitating the multiplicity of infection with HIV subtype C reveals a non-Poisson distribution of variants (M-R Abrahams, JA Anderson, EE Giorgi, C Seoighe, K Milsana, L-H Ping, GS Athreya, FK Treurnicht, BF Keele, N Wood, JF Gonzalez-Salazar, T Bhattacharya, H Chu, I Hoffman, S Galvin, C Mapanje, P Kazembe, R Thebus, S Fiscus, W Hide, MS Cohen, S Abdool Karim, BF Haynes, GM Shaw, BH Hahn, BT Korber, R Swanstrom, C Williamson, for the CAPRISA Acute Infection Study Team and the Center for HIV-AIDS Vaccine Immunology Consortium) Los Alamos report LA-UR-08-06483, October 2008. Journal of Virology 83:8 (2009) 3556–3567. ori:doi:10.1128/JVI.02132-08; pmid: 19193811; PMC2663249. Published ahead of print February 4, 2009 (Corrigendum: Journal of Virology 83:13 (2009) 6974–6974. ori:doi:10.1128/JVI.00832-09 ) 33 citations as of Apr 13, 2011.
  104. Genetic Identity, Biological Phenotype, and Evolutionary Pathways of Transmitted/Founder Viruses in Acute and Early HIV-1 Infection (Jesus F. Salazar-Gonzalez, Maria G. Salazar, Brandon F. Keele, Gerald H. Learn, Elena E. Giorgi, Hui Li, Julie M. Decker, Shuyi Wang, Joshua Baalwa, Matthias H. Kraus, Nicholas F. Parrish, Katharina S. Shaw, M. Brad Guffey, Katharine J. Bar, Katie L. Davis, Christina Ochsenbauer-Jambor, John C. Kappes, Michael S. Saag, Myron S. Cohen, Joesph Mulenga, Cynthia A. Derdeyn, Susan Allen, Eric Hunter, Martin Markowitz, Peter Hraber, Alan S. Perelson, Tanmoy Bhattacharya, Barton F. Haynes, Bette T. Korber, Beatrice H. Hahn, and George M. Shaw) Journal of Experimental Medicine 206:6 (2009) 1273–1289 ori:doi:10.1084/jem.20090378; pmid: 19487424; PMC2715054. Published online June 1, 2009. 73 citations as of Apr 13, 2011.
  105. Identification and the Characterization of Transmitted and Early Founder Virus Envelopes in Primary HIV-1 Infection (Brandon F. Keele, Elena E. Giorgi, Jesus Salazar-Gonzalez, Julie M. Decker, Kimmy T. Pham, Maria G. Salazar, Chuanxi Sun, Truman Grayson, Shuyi Wang, Hui Li, Xiping Wei, Chunlai Jiang, Jennifer L. Kirchherr, Feng Gao, Jeffrey A. Anderson, Li-Hua Ping, Ronald Swanstrom, Georgia D. Tomaras, William A. Blattner, Paul A. Goepfert, J. Michael Kilby, Michael S. Saag, Eric L. Delwart, Michael P. Busch, Myron S. Cohen, David C. Montefiori, Barton F. Haynes, Brian Gaschen, Gayathri S. Athreya, Ha Y. Lee, Natasha Wood, Cathal Seoighe, Alan S. Perelson, Tanmoy Bhattacharya, Bette T. Korber, Beatrice H. Hahn, George M. Shaw) Los Alamos report LA-UR-07-07974, November 2007. Proceedings of the National Academy of Sciences 105:21 (2008) 7552–7557 ori:doi:10.1073/pnas.0802203105; pmid: 18490657; PMC2387184. Published online May 19, 2008. 195 citations as of Apr 13, 2011.
  106. Web-based design and evaluation of T-cell vaccine candidates (James Thurmond, Hyejin Yoon, Carla Kuiken, Karina Yusim, Simon Perkins, James Theiler, Tanmoy Bhattacharya, Bette Korber, and Will Fischer). Los Alamos report LA-UR-07-08354, December 2007. Bioinformatics 24:14 (2008) 1639–1640 ori:doi:10.1093/bioinformatics/btn251; pmid: 18515277. Published online May 29, 2008 8 citations as of Apr 13, 2011.
  107. HLA Class-I Driven Evolution of Human Immunodeficiency Virus Type 1 Subtype C Proteome: Immune Escape and Viral Load (Christine M. Rousseau, Marcus G. Daniels, Jonathan M. Carlson, Carl Kadie, Hayley Crawford, Andrew Prendergast, Philippa Matthews, Rebecca Payne, Morgane Rolland, Dana N. Raugi, Brandon S. Maust, Gerald H. Learn, David C. Nickle, Hoosen Coovadia, Thumbi Ndung'u, Nicole Frahm, Christian Brander, Bruce D. Walker, Philip J. R. Goulder, Tanmoy Bhattacharya, David E. Heckerman, Bette T. Korber, and James I. Mullins) Journal of Virology 82:13 (2008) 6434–6446. ori:doi:10.1128/JVI.02455-07; pmid: 18434400; PMC2447109. Published ahead of print April 23, 2008 45 citations as of Apr 13, 2011.
  108. Evidence of Differential HLA Class I-Mediated Viral Evolution in Functional and Accessory/Regulatory Genes of HIV-1 (Zabrina L. Brumme, Chanson J. Brumme, David Heckerman, Bette T. Korber, Marcus Daniels, Jonathan Carlson, Carl Kadie, Tanmoy Bhattacharya, Celia Chui, James Szinger, Theresa Mo, Robert S. Hogg, Julio S.G. Montaner, Nicole Frahm, Christian Brander, Bruce D. Walker, and P. Richard Harrigan), Los Alamos report LA-UR-07-0410, January 2007. Los Alamos report LA-UR-07-0410, Jan 2007. Public Library of Science Pathogens 3:7 (2007) e94. ori:doi:10.1371/journal.ppat.0030094; pmid: 17616974; PMC1904471. Published online July 6, 2007. (Affiliation correction ibid. 3:8 (2007) e121. ori:doi:10.1371/journal.ppat.0030121. Published online August 31, 2007.) 60 citations as of Apr 13, 2011.
  109. Extensive Intra-subtype Recombination in South African Human Immunodeficiency Virus Type 1 Subtype C Infections (Christine M. Rousseau, Gerald H. Learn, Tanmoy Bhattacharya, David C. Nickle, David Heckerman, Senica Chetty, Christian Brander, Philip J.R. Goulder, Bruce D. Walker, Photini Kiepiela, Bette T. Korber, and James I. Mullins), Los Alamos report LA-UR-06-6156, September 2006. Journal of Virology 81:9 (2007) 4492–4500. ori:doi:10.1128/JVI.02050-06; pmid: 17314156; PMC1900147. Published ahead of print February 21, 2007 20 citations as of Apr 13, 2011.
  110. Clade Specific Differences between Human Immunodeficiency Virus Type 1 Clades B and C: Diversity and Correlations in C3–V4 Regions of gp120 (S. Gnanakaran, Dorothy Lang, Marcus Daniels, Tanmoy Bhattacharya, Cynthia Derdyn, and Bette Korber), Los Alamos report LA-UR-06-1255. Journal of Virology 81:9 (2007) 4886–4891. ori:doi:10.1128/JVI.01954-06; pmid: 17166900; PMC1900169. Published ahead of print December 13, 2006 24 citations as of Apr 13, 2011.
  111. Chiral Lattice Gauge theories from Warped Domain Walls and Ginsparg-Wilson Fermions (Tanmoy Bhattacharya, Matthew R. Martin, and Erich Poppitz), Los Alamos report LA-UR-06-2667, April 2006. ori:oai:arXiv.org:hep-lat/0605003 Physical Review D74:8 (2006) 085028; ori:doi:10.1103/PhysRevD.74.085028. Published Oct 30, 2006. [inspire]. 11 citations as of Apr 13, 2011.
  112. Human Leukocyte Antigen-Associated Sequence Polymorphisms in Hepatitis C Virus Reveal Reproducible Immune Responses and Constraints on Viral Evolution (Joerg Timm, Bin Li, Marcus G. Daniels, Tanmoy Bhattacharya, Laura L. Reyor, Rachel Allgaier, Thomas Kuntzen, Will Fischer, Brian E. Nolan, Jared Duncan, Julian Schulze zur Wiesch, Arthur Y. Kim, Nicole Frahm, Christian Brander, Raymond T. Chung, George M. Lauer, Bette T. Korber, and Todd M. Allen), Los Alamos report LA-UR-06-8196, November 2006. Hepatology, 46:2 (2007) 339–349 ori:doi:10.1002/hep.21702; pmid: 17559151. Published online June 8, 2007 34 citations as of Apr 13, 2011.
  113. Founder effects in the assessment of HIV polymorphisms and HLA allele associations or Founder effects contribute to perceived associations between HIV sequence polymorphisms and HLA class I alleles (Tanmoy Bhattacharya, Marcus Daniels, David Heckerman, Brian Foley, Nicole Frahm, Carl Kadie, Jonathan Carlson, Karina Yusim, Ben McMahon, Brian Gaschen, Simon Mallal, James I. Mullins, David C. Nickle, Joshua Herbeck, Christine Rousseau, Gerald H. Learn, Toshiyuki Miura, Christian Brander, and Bruce Walker, and Bette Korber) Los Alamos report LA-UR-06-3312, May 2006. Science 315:5818 (2007) 1583–1586 ori:doi:10.1126/science.1131528; pmid: 17363674.
    Subsumes
    Multiple factors impact negative associations between HIV sequence polymorphisms and HLA class I alleles Los Alamos report LA-UR-05-3897, May 2005. 93 citations as of Apr 13, 2011.
  114. Polyvalent HIV-1 vaccines for optimal coverage of potential T-cell epitopes in diverse global variants (Will Fischer, Simon Perkins, James Theiler, Tanmoy Bhattacharya, Karina Yusim, Robert Funkhouser, Carla Kuiken, Barton Haynes, Norman L. Letvin, Bruce D. Walker, Beatrice H. Hahn, and Bette T. Korber) Los Alamos report LA-UR-06-3608, May 2006. Nature Medicine 13:1 (2007) 100–106 ori:doi:10.1038/nm1461; pmid: 17187074. 72 citations as of Apr 13, 2011.
  115. Warped Domain Wall Fermions (Tanmoy Bhattacharya, Csaba Csáki, Matthew R. Martin, Yuri Shirman, and John Terning), Los Alamos report LA-UR-05-1569, March 2005. ori:oai:arXiv.org:hep-lat/0503011 Journal of High Energy Physics JHEP08 (2005) 061; ori:doi:10.1088/1126-6708/2005/08/061. [inspire]. 9 citations as of Apr 13, 2011.
  116. BK from quenched QCD with improved staggered fermions. or Testing improved staggered fermions with ms and BK. (Weonjong Lee, Tanmoy Bhattacharya, George T. Fleming, Rajan Gupta, Gregory Kilcup, and Stephen Sharpe), Los Alamos report LA-UR-04-4788 , University of Washington report UW-PT 04-11, and Seoul National University report SNUTP-04-008, July 2004. ori:oai:arXiv.org:hep-lat/0409047 Physical Review D71:09 (2005) 094501; ori:doi:10.1103/PhysRevD.71.094501. Published May 2, 2005. [inspire]. 21 citations as of Apr 13, 2011.
  117. Feedback cooling of atomic motion in cavity QED. (Tanmoy Bhattacharya, Salman Habib, Kurt Jacobs, Hideo Mabuchi, and Daniel A. Steck) Los Alamos report LA-UR-04-4687, July 2004. ori:oai:arXiv.org:quant-ph/0509039 Physical Review A74:1 (2006) 012322; ori:doi:10.1103/PhysRevA.74.012322. Published Jul 31, 2006. 16 citations as of Apr 13, 2011.
  118. Successive dominance of human immunodeficiency virus type 1 sequences in patients receiving combination antiretroviral therapy or Evolution of human immunodeficiency virus type 1 sequences in patients receiving combination antiretroviral therapy. (Carla Kuiken, Kevin Kunstman, Tanmoy Bhattacharya, Jennifer Kunstman, Kristina Kommander, John Phair, Benjamin Good, Satish Pillai, and Steven Wolinsky), Los Alamos report LA-UR-04-5456.
  119. Quantum Feedback Control of Atomic Motion in an Optical Cavity. (Daniel A. Steck, Kurt Jacobs, Hideo Mabuchi, Tanmoy Bhattacharya, and Salman Habib) Los Alamos report LA-UR-03-6826, September 2003; ori:oai:arXiv.org:quant-ph/0310153 . Physical Review Letters 92:22 (2004) 223004; ori:doi:10.1103/PhysRevLett.92.223004; pmid: 15245219. Published Jun 4, 2004. [inspire]. 41 citations as of Apr 13, 2011.
  120. The transition to classical chaos in a coupled quantum system through continuous measurement. (Shohini Ghose, Paul Alsing, Ivan Deutsch, Tanmoy Bhattacharya, Salman Habib, and Kurt Jacobs) Los Alamos report LA-UR-03-5886, August 2003; ori:oai:arXiv.org:quant-ph/0309093. Physical Review A69:5 (2004) 052116; ori:doi:10.1103/PhysRevA.69.052116. Published May 24, 2004. 18 citations as of Apr 13, 2011.
  121. Improved bilinears in lattice QCD with non-degenerate quarks. (Tanmoy Bhattacharya, Rajan Gupta, Weonjong Lee, Stephen Sharpe, and Jackson M.S. Wu) Los Alamos report LA-UR-03-4939, July 2003; University of Washington report UW/PT 03-20, September 2003. ori:oai:arXiv.org:hep-lat/0511014. Physical Review D73:3 (2006) 034504; ori:doi:10.1103/PhysRevD.73.034504. Published Feb 13, 2006. [inspire]. 15 citations as of Apr 13, 2011.
  122. Scaling behavior of discretization errors in renormalization and improvement constants. (Tanmoy Bhattacharya, Rajan Gupta, Weonjong Lee, and Stephen Sharpe) Los Alamos report LA-UR-03-3849, June 2003. ori:oai:arXiv.org:hep-lat/0509160. Physical Review D73:11 (2006) 114507; ori:doi:10.1103/PhysRevD.73.114507. Published Jun 14, 2006. [inspire]. 5 citations as of Apr 13, 2011.
  123. Timing of the HIV-1 subtype C epidemic in Ethiopia: An improved estimate using maximum likelihood methods. or Molecular Paleontology of HIV-1 M Subtype C in Ethiopia. (Una R. Smith, Tanmoy Bhattacharya, and Carla L. Kuiken) Los Alamos report LA-UR-02-7315, November 2002 and LA-UR-03-0468, 2003 HIV Dynamics and Evolution: 10th International Workshop, Lake Arrowhead, California, USA 13–16 April, 2003. Abstract number 22
  124. Reanalysis of HIV-1A putative recombinant sequences. (Una R. Smith, Tanmoy Bhattacharya, and Carla L. Kuiken) HIV Dynamics and Evolution: 9th International Workshop, 2002. Abstract number 21
  125. Continuous Quantum Measurement and the Quantum to Classical Transition. (Tanmoy Bhattacharya, Salman Habib, and Kurt Jacobs) Los Alamos report LA-UR-02-5289, August 2002; ori:oai:arXiv.org:quant-ph/0211036. Physical Review A67:4 (2003) 042103; ori:doi:10.1103/PhysRevA.67.042103. Published Apr 8, 2003. 16 citations as of Apr 13, 2011.
  126. Recovering Classical Dynamics from Coupled Quantum Systems through Continuous Measurement. (Shohini Ghose, Paul Alsing, Ivan Deutsch, Tanmoy Bhattacharya, Salman Habib, and Kurt Jacobs) Los Alamos report LA-UR-02-5290, August 2002; ori:oai:arXiv.org:quant-ph/0208064. Physical Review A67:5 (2003) 052102; ori:doi:10.1103/PhysRevA.67.052102. Published May 20, 2003. 4 citations as of Apr 13, 2011.
  127. Diversity Considerations in HIV-1 Vaccine Selection (Brian Gaschen, Jesse Taylor, Karina Yusim, Brian Foley, Feng Gao, Dorothy Lang, Vladimir Novitsky, Barton Haynes, Beatrice H. Hahn, Tanmoy Bhattacharya, and Bette Korber) Science 296:5577 (2002) 2354–2360. (June 28, 2002; number 5577) ori:doi:10.1126/science.1070441; pmid: 12089434. Available without subscription. Consensus and Ancestral State HIV Vaccines: Response (F. Gao, T. Bhattacharya, B. Gaschen, J. Taylor, J.P. Moore, V. Novitsky, K. Yusim, D. Lang, B. Foley, S. Beddows, M. Alam, B. Haynes, B.H. Hahn, and B. Korber) Science 299:5612 (2003) 1517–1518. (March 7, 2003; number 5612); ori:doi:10.1126/science.299.5612.1515c; author reply in pmid: 12624248. 317+7 citations as of Apr 13, 2011.
  128. Strange Happenings at the Quantum-Classical Boundary: The Delta-Kicked Rotor. or The δ-function-kicked rotor: Momentum diffusion and the quantum-classical boundary. (T. Bhattacharya, S. Habib, K. Jacobs, and K. Shizume) Los Alamos report LA-UR-01-1909 May 2001. Los Alamos report LA-UR-01-6307, November 2001. ori:oai:arXiv.org:quant-ph/0105086. Physical Review A65:3 (2002) 032115; ori:doi:10.1103/PhysRevA.65.032115. Published Feb 20, 2002. 8 citations as of Apr 13, 2011.
  129. Using Human Immunodeficiency Virus Type 1 Sequences to Infer Historical Features of the Acquired Immune Deficiency Syndrome Epidemic and Human Immunodeficiency Virus Evolution. (Karina Yusim, Martine Peeters, Oliver G. Pybus, Tanmoy Bhattacharya, Éric Delaporte, Claire Mulanga, Mark Muldoon, James Theiler, and Bette Korber) Philosophical Transactions of the Royal Society, London, B 356 (2001) 855–866; ori:doi:10.1098/rstb.2001.0859; pmid: 11405933; PMC1088479. 34 citations as of Apr 13, 2011.
  130. Order a Improved Renormalization Constants. (T. Bhattacharya, R. Gupta, W. Lee, and S. Sharpe) Los Alamos report LA-UR-00-3538 and University of Washington report UW/PT-00-16, September 2000. ori:oai:arXiv.org:hep-lat/0009038. Physical Review D63:7 (2001) 074505; ori:doi:10.1103/PhysRevD.63.074505. Published Mar 13, 2001. [inspire]. 67 citations as of Apr 13, 2011.
  131. Timing the Ancestor of the HIV-1 Pandemic Strains. (B. Korber, M. Muldoon, J. Theiler, F. Gao, R. Gupta, A. Lapedes, B.H. Hahn, S. Wolinsky, and T. Bhattacharya) Science 288:5472 (2000) 1789–1796. (June 9, 2000; number 5472) ori:doi:10.1126/science.288.5472.1789; pmid: 10846155. Search for the Origin of HIV and AIDS : Response. (B. Korber, T. Bhattacharya, J. Theiler, R. Gupta, A. Lapedes, B. Hahn, F. Gao, M. Muldoon, and S. Wolinsky) Science 289:5482 (2000) 1140–1141. (August 18, 2000; number 5482) ori:doi:10.1126/science.289.5482.1140; part of pmid: 10970225. 395+5 citations as of Apr 13, 2011.
  132. Continuous Quantum Measurement and the Emergence of Classical Chaos. (T. Bhattacharya, S. Habib, and K. Jacobs) Los Alamos report LA-UR-99-3187 June 1999. ori:oai:arXiv.org:quant-ph/9906092. Physical Review Letters 85:23 (2000) 4852–4855; ori:doi:10.1103/PhysRevLett.85.4852; pmid: 11102134. [inspire]. 60 citations as of Apr 13, 2011.
  133. Non-perturbative Renormalization Constants using Ward Identities. (T. Bhattacharya, S. Chandrasekharan, R. Gupta, W. Lee, and S. Sharpe) Los Alamos report LAUR-99-1717, University of Washington report UW-PT/98-15, University of Tsukuba report UTCCP-P-56, and Duke University report DUKE-TH-99-185, April 1999. ori:oai:arXiv.org:hep-lat/9904011 Physics Letters B461:1–2 (1999) 79–88; ori:doi:10.1016/S0370-2693(99)00796-0. [inspire]. 27 citations as of Apr 13, 2011.
  134. Heavy-light Mesons and Baryons with b quarks. (A. Ali Khan, T. Bhattacharya, S. Collins, C.T.H. Davies, R. Gupta, C. Morningstar, J. Shigemitsu, and J. Sloan) Los Alamos report LAUR-99-723, OSU report OHSTPY-HEP-T-98-018, and University of Tsukuba report UTCCP-P-77, December 1999. ori:oai:arXiv.org:hep-lat/9912034 Physical Review D62:5 (2000) 054505; ori:doi:10.1103/PhysRevD.62.054505. Published Jul 27, 2000. [inspire]. 61 citations as of Apr 13, 2011.
  135. B Meson Decay Constants from NRQCD. (A. Ali Khan, T. Bhattacharya, S. Collins, C.T.H. Davies, R. Gupta, C. Morningstar, J. Shigemitsu, and J. Sloan) Los Alamos report LA-UR-97-4642 and OSU report OHSTPY-HEP-T-97-017, January 1998. ori:oai:arXiv.org:hep-lat/9801038 Physics Letters B427:1–2 (1998) 132–140; ori:doi:10.1016/S0370-2693(98)00323-2. [inspire]. 48 citations as of Apr 13, 2011.
  136. Duality and the Extraction of Light Quark Masses From Finite Energy and QCD Sum Rules. or Extraction of Light Quark Masses from Sum Rule Analyses of Axial Vector and Vector Current Ward IDentities. (Tanmoy Bhattacharya, Rajan Gupta, and Kim Maltman) Los Alamos report LA-UR-96-2698, March 1997. ori:oai:arXiv.org:hep-ph/9703455 Physical Review D57:9 (1998) 5455–5467; ori:doi:10.1103/PhysRevD.57.5455. [inspire]. 31 citations as of Apr 13, 2011.
  137. Matrix Elements of 4-fermion Operators with Quenched Wilson Fermions. (R. Gupta, T. Bhattacharya, and S. Sharpe) Los Alamos report LA-UR-96-1829 and University of Washington report UW/PT-96-12, November 1996. ori:oai:arXiv.org:hep-lat/9611023 Physical Review D55:7 (1997) 4036–4054; ori:doi:10.1103/PhysRevD.55.4036. [inspire]. 127 citations as of Apr 13, 2011.
  138. Comment on “Gravitationally Induced Neutrino-Oscillation Phases.” or Gravitationally induced neutrino oscillation phases in static spacetimes (T. Bhattacharya, S. Habib, and E. Mottola) ori:oai:arXiv.org:gr-qc/9605074 Physical Review D59:6 (1999) 067301; ori:doi:10.1103/PhysRevD.59.067301. [spires(eprint), spires(paper)]. 14+34 citations as of Apr 13, 2011.
  139. Light Quark Masses from Lattice QCD. (R. Gupta and T. Bhattacharya) Los Alamos report LA-UR-96-1840, May 1996. ori:oai:arXiv.org:hep-lat/9605039 Physical Review D55:11 (1997) 7203–7217; ori:doi:10.1103/PhysRevD.55.7203. [inspire]. 116 citations as of Apr 13, 2011.
  140. Large q Expansion of the 2D q-states Potts' Model. (T. Bhattacharya, R. Lacaze and A. Morel) Saclay report SACLAY-SPHT-96-001, January 1996. ori:oai:arXiv.org:hep-lat/9601012 Journal of Physics I7:1 (1997) 81–103; ori:doi:10.1051/jp1:1997127. [inspire].
  141. Hadron Spectrum with Wilson fermions. (T. Bhattacharya, R. Gupta, G. Kilcup, and S. Sharpe) Los Alamos report LA-UR-95-2354, October 1995. ori:oai:arXiv.org:hep-lat/9512021 Physical Review D53:11 (1996) 6486–6508; ori:doi:10.1103/PhysRevD.53.6486; pmid: 10019932. [inspire]. 65 citations as of Apr 13, 2011.
  142. Decay Constants with Wilson Fermions at β=6.0. (T. Bhattacharya and R. Gupta) Los Alamos report LA-UR-95-2355, October 1995. ori:oai:arXiv.org:hep-lat/9510044 Physical Review D54:1 (1996) 1155–1166; ori:doi:10.1103/PhysRevD.54.1155; pmid: 10020582. [inspire]. 21 citations as of Apr 13, 2011.
  143. Large Energy Cumulants in the 2-d Potts' Model and their Effects in Finite Size Analysis. (T. Bhattacharya, R. Lacaze, and A. Morel) Saclay Preprint SACLAY-SPHT-94-008, July 1994. ori:oai:arXiv.org:hep-lat/9407004 Nuclear Physics B435:3 (1995) 526–554; ori:doi:10.1016/0550-3213(94)00393-S. [inspire]. 13 citations as of Apr 13, 2011.
  144. Semileptonic Form-Factors of Heavy-Light Mesons From Lattice QCD. (R. Gupta, T. Bhattacharya, and D. Daniel) Los Alamos report, LA-UR-93-3580, October 1993. ori:oai:arXiv.org:hep-lat/9310007 5 citations as of Apr 13, 2011.
  145. The Free Energy of the Potts' Model: From the Continuous to the First Order Transition Region. (T. Bhattacharya, R. Lacaze, and A. Morel) Saclay report SACLAY-SPHT-93-022, March 1993. ori:oai:arXiv.org:hep-th/9303075 Europhys. Lett. 23 (1993) 547. ori:doi:10.1209/0295-5075/23/8/002. [inspire]. 15 citations as of Apr 13, 2011.
  146. Critical Behavior of the Antiferromagnetic Heisenberg Model on a Stacked Triangular Lattice. (T. Bhattacharya, A. Billoire, R. Lacaze, and Th. Jolicœur) Saclay report SACLAY-SPHT-93-015, February 1993. ori:oai:arXiv.org:cond-mat/9302019 Journal of Physics I4:2 (1994) 181–186; ori:doi:10.1051/jp1:1994131. [inspire]. 21 citations as of Apr 13, 2011.
  147. Z(N) Interface Tension in a Hot SU(N) Gauge Theory. (T. Bhattacharya, A. Gocksch, C.P. Korthals Altes, and R.D. Pisarski) Brookhaven Preprint BNL-47625, February 1992. ori:oai:arXiv.org:hep-ph/9205231 Nuclear Physics B383:3 (1992) 497–524; ori:doi:10.1016/0550-3213(92)90086-Q. [inspire]. 91 citations as of Apr 13, 2011.
  148. Particles Near Threshold. (T. Bhattacharya and S. Willenbrock) Brookhaven Preprint BNL-46481, July 1991. Physical Review D47:9 (1993) 4022–4027; ori:doi:10.1103/PhysRevD.47.4022; pmid: 10016028. [inspire]. 33 citations as of Apr 13, 2011.
  149. Interface Tension in an SU(N) Gauge Theory at High Temperature. (T. Bhattacharya, A. Gocksch, C.P. Korthals Altes, and R.D. Pisarski) Brookhaven Preprint BNL-45297, October 1990. Physical Review Letters 66:8 (1991) 998–1000; ori:doi:10.1103/PhysRevLett.66.998; pmid: 10043969; [inspire]. 94 citations as of Apr 13, 2011.
  150. Tree Unitarity in Broken Supergravity. 2. Double Gravitino Amplitude. (T. Bhattacharya and P. Roy) TIFR report TIFR/TH/88-41, October 1988. Nuclear Physics B328:2 (1989) 481; ori:doi:10.1016/0550-3213(89)90338-6. [inspire]. 14 citations as of Apr 13, 2011.
  151. Tree Unitarity in Broken Supergravity. 1. Single Gravitino Amplitude. (T. Bhattacharya and P. Roy) TIFR report TIFR/TH/88-38, June 1988. Nuclear Physics B328:2 (1989) 469; ori:doi:10.1016/0550-3213(89)90337-4. [inspire]. 11 citations as of Apr 13, 2011.
  152. Role of Chiral Scalar and Pseudoscalar in Two Photon Production of a Superlight Gravitino. (T. Bhattacharya and P. Roy) TIFR report TIFR/TH/88-11, May 1988. Physical Review D38:7 (1988) 2284–2287; ori:doi:10.1103/PhysRevD.38.2284; pmid: 9959383; [inspire]. 36 citations as of Apr 13, 2011.
  153. Unitarity Limit on the Gaugino-Gravitino Mass Ratio. (T. Bhattacharya and P. Roy) TIFR report TIFR/TH/88-4, March 1988. Physics Letters B206:4 (1988) 655–660; ori:doi:10.1016/0370-2693(88)90713-7 [inspire]. 28 citations as of Apr 13, 2011.
  154. Probing a Superlight Gravitino in Photon-Photon Collisions. (T. Bhattacharya and P. Roy) TIFR report TIFR/TH/87-15, July 1987. Physical Review Letters 59:14 (1987) 1517–1520, ori:doi:10.1103/PhysRevLett.59.1517; pmid: 10035256; ERRATUM ibid. 60:14 (1988) 1455, ori:doi:10.1103/PhysRevLett.60.1455.2. [inspire]. 24 citations as of Apr 13, 2011.
  155. Constraint on Unstable Photino Mass from an Ultralight Gravitino. (T. Bhattacharya and P. Roy) TIFR report TIFR/TH/87-1, Mar 1987. Pramana 28:6 (1987) L699–L703, ori:doi:10.1007/BF02892872. [inspire]. 1 citation as of Apr 13, 2011.
  156. The Gel'fand Realization and the Exceptional Representations of SL(2,R). (D. Basu and T. Bhattacharya) Journal of Mathematical Physics 26:1 (1985) 12–17; ori:doi:10.1063/1.526799. [inspire].

Talks, Abstracts, and Unreferreed Publications

This section contains a bunch of talk abstracts that appeared in published lists of abstracts, unrefereed talks that were written up, and certain miscellaneous kinds of unreferreed publications (e.g., prefaces, articles for internal publication). If it is refereed and appeared as a full paper (e.g., in computer science), it is included in the first section, not here. Proceedings in which only a collaboration I am part of, but not me personally, is listed as an author are listed separately in the next section.

  1. Rise of Complexity Sciences in a Reductionist World (Tanmoy Bhattacharya) Los Alamos report LA-UR-22-31342, In Foundational Papers in Complexity Science, Edited by David C. Krakauer, Volume 2, Santa Fe, NM, SFI Press, 2024, 1191–1203; ori:doi:10.37911/9781947864535.39.
  2. Electroweak box diagram contribution for pion and kaon decay from lattice QCD (Jun-Sik Yoo, Tanmoy Bhattacharya, Rajan Gupta, Santanu Mondal, and Boram Yoon) Proceedings of the 40th annual International Symposium on Lattice Field Theory, 30 July–5 August 2023, Fermilab, Batavia, IL, United States. Eds. Ian Cloet, Aida X. El-Khadra, George Fleming, Andreas Kronfeld, Henry Lamm, James Osborn, James N. Simone, Mikhail Stephanov, Ruth Van de Water, Michael Wagman, and Yong Zhao. Proceedings of Science LATTICE2023 (2024) 257; ori:doi:10.22323/1.453.0257. [inspire]
  3. Progress report on testing robustness of the Newton method in data analysis on 2-point correlation function using a MILC HISQ ensemble or Progress report on data analysis of 2 point correlation functions for semileptonic decay B(s)→D(*)(s)ℓν form factors (Tanmoy Bhattacharya, Benjamin J. Choi, Rajan Gupta, Yong-Chull Jang, Sungyeob Jwa, Sunghee Kim, Sunkyu Lee, Weonjong Lee, Jaehoon Leem, Jeongwhan Pak, and Sungwoo Park) Los Alamos report LA-UR-23-34205, ori:oai:arXiv.org:2401.01584 [hep-lat] Proceedings of the 40th annual International Symposium on Lattice Field Theory, 30 July–5 August 2023, Fermilab, Batavia, IL, United States. Eds. Ian Cloet, Aida X. El-Khadra, George Fleming, Andreas Kronfeld, Henry Lamm, James Osborn, James N. Simone, Mikhail Stephanov, Ruth Van de Water, Michael Wagman, and Yong Zhao. Proceedings of Science LATTICE2023 (2024) 155; ori:doi:10.22323/1.453.0155. [inspire]
  4. Neutron electric dipole moment from isovector quark chromo-electric dipole moment (Tanmoy Bhattacharya, Vincenzo Cirigliano, Rajan Gupta, Emanuele Mereghetti, Jun-Sik Yoo, and Boram Yoon) Los Alamos report LA-UR-23-29484, ori:oai:arXiv.org:2404.13516 [hep-lat] Proceedings of the 40th annual International Symposium on Lattice Field Theory, 30 July–5 August 2023, Fermilab, Batavia, IL, United States. Eds. Ian Cloet, Aida X. El-Khadra, George Fleming, Andreas Kronfeld, Henry Lamm, James Osborn, James N. Simone, Mikhail Stephanov, Ruth Van de Water, Michael Wagman, and Yong Zhao. Proceedings of Science LATTICE2023 (2024) 339; ori:doi:10.22323/1.453.0339. [inspire]
  5. Update on flavor diagonal nucleon charges from clover fermions or Flavor diagonal nucleon charges from clover fermions on MILC HISQ ensembles (Sungwoo Park, Tanmoy Bhattacharya, Rajan Gupta, Huey-Wen Lin, and Santanu Mondal, Boram Yoon) Livermore report LLNL-PROC-858664, Los Alamos report LA-UR-24-20016, ori:oai:arXiv.org:2401.00721 [hep-lat] Proceedings of the 40th annual International Symposium on Lattice Field Theory, 30 July–5 August 2023, Fermilab, Batavia, IL, United States. Eds. Ian Cloet, Aida X. El-Khadra, George Fleming, Andreas Kronfeld, Henry Lamm, James Osborn, James N. Simone, Mikhail Stephanov, Ruth Van de Water, Michael Wagman, and Yong Zhao. Proceedings of Science LATTICE2023 (2024) 328; ori:doi:10.22323/1.453.0328. [inspire]
  6. Current progress on the semileptonic form factors for 𝑩̅→𝑫∗lν̅ decay using the Oktay-Kronfeld action (Tanmoy Bhattacharya, Benjamin J. Choi, Rajan Gupta, Yong-Chull Jang, Sungyeob Jwa, Sunghee Kim, Sunkyu Lee, Weonjong Lee, Jaehoon Leem, Jeongwhan Pak, and Sungwoo Park) Los Alamos report LA-UR-23-34204, ori:oai:arXiv.org:2401.01561 [hep-lat] Proceedings of the 40th annual International Symposium on Lattice Field Theory, 30 July–5 August 2023, Fermilab, Batavia, IL, United States. Eds. Ian Cloet, Aida X. El-Khadra, George Fleming, Andreas Kronfeld, Henry Lamm, James Osborn, James N. Simone, Mikhail Stephanov, Ruth Van de Water, Michael Wagman, and Yong Zhao. Proceedings of Science LATTICE2023 (2024) 245; ori:doi:10.22323/1.453.0245. [inspire]
  7. Quantum Information Science and Technology for Nuclear Physics. Input into U.S. Long-Range Planning, 2023 (Douglas Beck, Joseph Carlson, Zohreh Davoudi, Joseph Formaggio, Sofia Quaglioni, Martin Savage, Joao Barata, Tanmoy Bhattacharya, Michael Bishof, Ian Cloet, Andrea Delgado, Michael DeMarco, Caleb Fink, Adrien Florio, Marianne Francois, Dorota Grabowska, Shannon Hoogerheide, Mengyao Huang, Kazuki Ikeda, Marc Illa, Kyungseon Joo, Dmitri Kharzeev, Karol Kowalski, Wai Kin Lai, Kyle Leach, Ben Loer, Ian Low, Joshua Martin, David Moore, Thomas Mehen, Niklas Mueller, James Mulligan, Pieter Mumm, Francesco Pederiva, Rob Pisarski, Mateusz Ploskon, Sanjay Reddy, Gautam Rupak, Hersh Singh, Maninder Singh, Ionel Stetcu, Jesse Stryker, Paul Szypryt, Semeon Valgushev, Brent VanDevender, Samuel Watkins, Christopher Wilson, Xiaojun Yao, Andrei Afanasev, Akif Baha Balantekin, Alessandro Baroni, Raymond Bunker, Bipasha Chakraborty, Ivan Chernyshev, Vincenzo Cirigliano, Benjamin Clark, Shashi Kumar Dhiman, Weijie Du, Dipangkar Dutta, Robert Edwards, Abraham Flores, Alfredo Galindo-Uribarri, Ronald Fernando Garcia Ruiz, Vesselin Gueorguiev, Fanqing Guo, Erin Hansen, Hector Hernandez, Koichi Hattori, Philipp Hauke, Morten Hjorth-Jensen, Keith Jankowski, Calvin Johnson, Denis Lacroix, Dean Lee, Huey-Wen Lin, Xiaohui Liu, Felipe J. Llanes-Estrada, John Looney, Misha Lukin, Alexis Mercenne, Jeff Miller, Emil Mottola, Berndt Mueller, Benjamin Nachman, John Negele, John Orrell, Amol Patwardhan, Daniel Phillips, Stephen Poole, Irene Qualters, Mike Rumore, Thomas Schaefer, Jeremy Scott, Rajeev Singh, James Vary, Juan-Jose Galvez-Viruet, Kyle Wendt, Hongxi Xing, Liang Yang, Glenn Young, Fanyi Zhao) ori:oai:arXiv.org:2303.00113 [nucl-ex] [inspire].
  8. Electroweak box diagrams on the lattice for pion and neutron decay (Jun-Sik Yoo, Tanmoy Bhattacharya, Rajan Gupta, Santanu Mondal, and Boram Yoon) Los Alamos report LA-UR-22-26124, LA-UR-22-28091, and LA-UR-22-33079, ori:oai:arXiv.org:2212.12830 [hep-lat] Proceedings of the 39th annual International Symposium on Lattice Field Theory, 8–13 August 2022, Bonn, Germany. Eds. Szabolcs Borsanyi, Stephan Durr, Zoltan Fodor, Andreas Frommer, Jana N. Günther, Christian Hoelbling, Francesco Knechtli, Stephan Krieg, Thomas Lippert, Thomas Luu, Uri-Gerrit Meißner, Dirk Pleiter, Akaki Rusetsky, Fernanda Steffens, Estela Suarez, Kálmán K. Szabó, and Carsten Urbach. Proceedings of Science LATTICE2022 (2023) 360; ori:doi:10.22323/1.430.0360. [inspire]
  9. nEDM from the theta-term and chromoEDM operators (Tanmoy Bhattacharya, Vincenzo Cirigliano, Rajan Gupta, Emanuele Mereghetti, and Boram Yoon) Los Alamos report LA-UR-22-33051, ori:oai:arXiv.org:2301.08161 [hep-lat] Proceedings of the 40th annual International Symposium on Lattice Field Theory, 8–13 August 2022, Bonn, Germany. Eds. Szabolcs Borsanyi, Stephan Durr, Zoltan Fodor, Andreas Frommer, Jana N. Günther, Christian Hoelbling, Francesco Knechtli, Stephan Krieg, Thomas Lippert, Thomas Luu, Uri-Gerrit Meißner, Dirk Pleiter, Akaki Rusetsky, Fernanda Steffens, Estela Suarez, Kálmán K. Szabó, and Carsten Urbach. Proceedings of Science LATTICE2022 (2023) 304; ori:doi:10.22323/1.430.0304. [inspire]
  10. Nucleon form factors and pion-nucleon sigma term (Rajan Gupta, Tanmoy Bhattacharya, Vincenzo Cirigliano, Martin Hoferichter, Yong-Chull Jang, Balint Joo, Emanuele Mereghetti, Santanu Mondal, Sungwoo Park, Frank Winter, and Boram Yoon) Los Alamos report LA-UR-22-33201, ori:oai:arXiv.org:2301.07885 [hep-lat] Proceedings of the 39th annual International Symposium on Lattice Field Theory, 8–13 August 2022, Bonn, Germany. Eds. Szabolcs Borsanyi, Stephan Durr, Zoltan Fodor, Andreas Frommer, Jana N. Günther, Christian Hoelbling, Francesco Knechtli, Stephan Krieg, Thomas Lippert, Thomas Luu, Uri-Gerrit Meißner, Dirk Pleiter, Akaki Rusetsky, Fernanda Steffens, Estela Suarez, Kálmán K. Szabó, and Carsten Urbach. Proceedings of Science LATTICE2022 (2023) 427; ori:doi:10.22323/1.430.0427. [inspire]
  11. Update on Flavor Diagonal Nucleon Charges (Sungwoo Park, Tanmoy Bhattacharya, Rajan Gupta, Huey-Wen Lin, Santanu Mondal, and Boram Yoon) ori:oai:arXiv.org:2301.07890 [hep-lat] Proceedings of the 39th annual International Symposium on Lattice Field Theory, 8–13 August 2022, Bonn, Germany. Eds. Szabolcs Borsanyi, Stephan Durr, Zoltan Fodor, Andreas Frommer, Jana N. Günther, Christian Hoelbling, Francesco Knechtli, Stephan Krieg, Thomas Lippert, Thomas Luu, Uri-Gerrit Meißner, Dirk Pleiter, Akaki Rusetsky, Fernanda Steffens, Estela Suarez, Kálmán K. Szabó, and Carsten Urbach. Proceedings of Science LATTICE2022 (2023) 106; ori:doi:10.22323/1.430.0118. [inspire]
  12. Abstention in Regression (Cristina Garcia Cardona, Jamaludin Mohd-Yusof, and Tanmoy Bhattacharya) Los Alamos report LA-UR-22-32066; Los Alamos report LA-UR-23-22064; Proceedings of the 5th International Conference on Uncertainty Quantification in Computational Sciences and Engineering (UNCECOMP 2023), Athens, Greece 12–14 June, 2023, In Review.
  13. Exascale Deep Learning Enabled Precision Medicine for Cancer (CANDLE) (Thomas Brettin, Rick Stevens, Jamal Mohd-Yusof, Cristina Garcia Cardona, John Gounley, Georgia Tourassi, Adam Moody, Brian Van Essen, Frank Alexander, Justin Wozniak, Fred Streitz, and Tanmoy Bhattacharya) Proceedings of the 2023 Exascale Computing Project Annual Meeting, 17–20 January 2023, Houston, TX, USA.
  14. UQ in AI for Science (Tanmoy Bhattacharya, and Cristina Garcia Cardona, Jamaludin Mohd-Yusof) Los Alamos report LA-UR-22-21448; In Artificial Intelligence for Science, by Alok Choudhary, Geoffrey Fox, and Tony Hey, World Scientific, 2023, ISBN: 978-981-126-566-2, doi:10.1142/13123.
  15. AI and Theoretical Particle Physics (Rajan Gupta, Tanmoy Bhattacharya, and Boram Yoon) Los Alamos report LA-UR-22-22125; ori:oai:arXiv.org:2205.05803 [hep-lat] In Artificial Intelligence for Science, by Alok Choudhary, Geoffrey Fox, and Tony Hey, World Scientific, 2023, ISBN: 978-981-126-566-2, doi:10.1142/13123. [inspire].
  16. Synergy between NP and HEP research goals and efforts in fundamental symmetries and interactions (Tanmoy Bhattacharya, Rajan Gupta, and Kate Scholberg) Los Alamos National Laboratory report LA-UR-23-20045, ori:oai:arXiv.org:2301.03086 [hep-ph] [inspire].
  17. The pion-nucleon sigma term from lattice QCD (Rajan Gupta, Tanmoy Bhattacharya, Martin Hoferichter, Emanuele Mereghetti, Sungwoo Park, and Boram Yoon) Los Alamos report LA-UR-22-22580. ori:oai:arXiv.org:2203.13862 [hep-lat] Proceedings of the The 10th International Workshop on Chiral Dynamics, Beijing, China, 15–19 November 2021. Proceedings of Science CD2021 (2024). 060; ori:doi:10.22323/1.413.0060. [inspire].
  18. Report of the Snowmass 2021 Topical Group on Lattice Gauge Theory (Zohreh Davoudi, Ethan T. Neil, Christian W. Bauer, Tanmoy Bhattacharya, Thomas Blum, Peter Boyle, Richard C. Brower, Simon Catterall, Norman H. Christ, Vincenzo Cirigliano, Gilberto Colangelo, Carleton DeTar, William Detmold, Robert G. Edwards, Aida X. El-Khadra, Steven Gottlieb, Rajan Gupta, Daniel C. Hackett, Anna Hasenfratz, Taku Izubuchi, William I. Jay, Luchang Jin, Christopher Kelly, Andreas S. Kronfeld, Christoph Lehner, Huey-Wen Lin, Meifeng Lin, Andrew T. Lytle, Stefan Meinel, Yannick Meurice, Swagato Mukherjee, Amy Nicholson, Sasa Prelovsek, Martin J. Savage, Phiala E. Shanahan, Ruth S. Van de Water, Michael L. Wagman, and Oliver Witzel) University of Maryland report UMD-PP-022-08, Los Alamos National Laboratory report LA-UR-22-2931, Fermilab report FERMILAB-CONF-22-703-T, ori:oai:arXiv.org:2209.10758 [hep-lat] [inspire].
  19. Fundamental Physics in Small Experiments (T. Blum, P. Winter, T. Bhattacharya, T.Y. Chen, V. Cirigliano, D. DeMille, A. Gerarchi, N.R. Hutzler, T.M. Ito, O. Kim, R. Lehnert, W.M. Morse, and Y.K. Semertzidis) Los Alamos report LA-UR-22-29372. ori:oai:arXiv.org:2209.08041 [hep-ex] [inspire].
  20. Lattice QCD and Particle Physics (Andreas S. Kronfeld, Tanmoy Bhattacharya, Thomas Blum, Norman H. Christ, Carleton DeTar, William Detmold, Robert Edwards, Anna Hasenfratz, Huey-Wen Lin, Swagato Mukherjee, Konstantinos Orginos, Richard Brower, Vincenzo Cirigliano, Zohreh Davoudi, Bálint Jóo, Chulwoo Jung, Christoph Lehner, Stefan Meinel, Ethan T. Neil, Peter Petreczky, David G. Richards, Alexei Bazavov, Simon Catterall, Jozef J. Dudek, Aida X. El-Khadra, Michael Engelhardt, George T. Fleming, Joel Giedt, Rajan Gupta, Maxwell T. Hansen, Taku Izubuchi, Fritzof Karsch, Jack Laiho, Keh-Fei Liu, Aaron S. Meyer, Enrico Rinaldi, Martin Savage, David Shaich, Phiala E. Shanahan, Stephen R. Sharpe, Raza Sufian, Sergey Syritsyn, Ruth S. Van de Water, Michael L. Wagman, Evan Weinberg, Oliver Witzel, Christopher Aubin, Peter Boyle, Shailesh Chandrasekharan, Ian C. Clöet, Martha Constantinou, Kimmy Kushman, Thomas DeGrand, Zoltan Fodor, Sam Foreman, Steven Gottlieb, Daniel Hoying, Yong-Chull Jang, William I. Jay, Xiao-Yong Jin, Christopher Kelly, Julius Kuti, Henry Lamm, Meifeng Lin, Yin Lin, Andrew T. Lytle, Paul Mackenzie, Jeffrey Mandula, Yannick Meurice, Christopher Monahan, Colin Morningstar, James C. Osborn, Sungwoo Park, James N. Simone, Alexei Strelchenko, Masaaki Tomii, Alejandro Vaquero, Pavlos Vranas, Bigeng Wang, Walter Wilcox, Boram Yoon, and Yong Zhao) ori:oai:arXiv.org:2207.07641 [hep-lat] [inspire].
  21. Learning Not to Answer: Training a Multi-Task Abstaiing Classifier Using PID Control (Jamaludin Mohd-Yusof, Sunil Thulasidasan, Sayera Dhaubhadel, Cristina Garcia Cardona, and Tanmoy Bhattacharya) Los Alamos report LA-UR-21-30329 and LA-UR-22-23372; Proceedings of the SIAM Conference on Uncertainty Quantification (UQ22), Atlanta, GA, USA 12–15 April, 2022,
  22. When Abstention Is Really the Best Policy (Sayera Dhaubhadel, Jamaludin Mohd-Yusof, Sunil Thulasidasan, Kumkum Ganguly, Cristina Garcia Cardona, Benjamin McMahon, and Tanmoy Bhattacharya) Los Alamos report LA-UR-21-30330 and LA-UR-22-23355; Proceedings of the SIAM Conference on Uncertainty Quantification (UQ22), Atlanta, GA, USA 12–15 April, 2022,
  23. Nucleon isovector momentum fraction, helicity and transversity moment using Lattice QCD (Santanu Mondal, Tanmoy Bhattacharya, Rajan Gupta, Bálint Joó, Huey-Wen Lin, Sungwoo Park, Frank Winter, and Boram Yoon) Los Alamos report LA-UR-21-32143, MSU publication MSUHEP-21-036, ori:oai:arXiv.org:2201.00067 [hep-lat] Proceedings of the 38th annual International Symposium on Lattice Field Theory, 26–30 July 2021, Ed. Meifeng Lin. Proceedings of Science LATTICE2021 (2022) 513; ori:doi:10.22323/1.396.0513. [inspire]
  24. Improved data analysis on two-point correlation function with sequential Bayesian method (Tanmoy Bhattacharya, Benjamin D. Choi, Rajan Gupta, Yong-Chull Jang, Sungyeob Jwa, Sunkyu Lee, Weonjong Lee, Jaehoon Leem, Sungwoo Park, and Boram Yoon) ori:oai:arXiv.org:2204.05848 [hep-lat] Proceedings of the 38th annual International Symposium on Lattice Field Theory, 26–30 July 2021, Ed. Meifeng Lin. Proceedings of Science LATTICE2021 (2022) 136; ori:doi:10.22323/1.396.0136 [inspire].
  25. Calculation of neutron electric dipole moment due to the QCD topological term, Weinberg three-gluon operator and the quark chromoelectric moment (Tanmoy Bhattacharya, Vincenzo Cirigliano, Rajan Gupta, Emanuele Mereghetti, and Boram Yoon) Los Alamos report LA-UR-21-24151, LA-UR-21-31575. ori:oai:arXiv.org:2203.03746 [hep-lat] Proceedings of the 38th annual International Symposium on Lattice Field Theory, 26–30 July 2021, Ed. Meifeng Lin. Proceedings of Science LATTICE2021 (2022) 567; ori:doi:10.22323/1.396.0567. [inspire]
  26. Flavor diagonal nucleon charges (Sungwoo Park, Tanmoy Bhattacharya, Rajan Gupta, Huey-Wen Lin, Santanu Mondal, Boram Yoon, and Rui Zhang) Los Alamos report LA-UR-21-27171, ori:oai:arXiv.org:2203.09584 [hep-lat] Proceedings of the 38th annual International Symposium on Lattice Field Theory, 26–30 July 2021, Ed. Meifeng Lin. Proceedings of Science LATTICE2021 (2022) 558; ori:doi:10.22323/1.396.0558. [inspire]
  27. Strange and charm contributions to nucleon charges and moments (Rui Zhang, Tanmoy Bhattacharya, Rajan Gupta, Huey-Wen Lin, Santanu Mondal, Sungwoo Park, and Boram Yoon) Los Alamos report LA-UR-21-28804, ori:oai:arXiv.org:2109.01191 [hep-lat] Proceedings of the 38th annual International Symposium on Lattice Field Theory, 26–30 July 2021, Ed. Meifeng Lin. Proceedings of Science LATTICE2021 (2022) 498; ori:doi:10.22323/1.396.0498. [inspire]
  28. Excited states and precision results for nucleon charges and form factors (Rajan Gupta, Tanmoy Bhattacharya, Vincenzo Cirigliano, Martin Hoferichter, Yong-Chull Jang, Bálint Joó, Emanuele Mereghetti, Santanu Mondal, Sungwoo Park, Frank Winter, and Boram Yoon) Los Alamos report LA-UR-21-32449, ori:oai:arXiv.org:2203.05647 [hep-lat] Proceedings of the 38th annual International Symposium on Lattice Field Theory, 26–30 July 2021, Ed. Meifeng Lin. Proceedings of Science LATTICE2021 (2022) 478; ori:doi:10.22323/1.396.0478. [inspire]
  29. Qubit Regularization of Asymptotic Freedom (Hersh Singh, Shailesh Chandrasekharan, Tanmoy Bhattacharya, Rajan Gupta, and Alex Buser) Proceedings of the 38th annual International Symposium on Lattice Field Theory, 26–30 July 2021, Ed. Meifeng Lin.
  30. Nucleon Form Factors in the Continuum Limit from Clover-on-HISQ Formulation (Yong-Chull Jang, Rajan Gupta, Tanmoy Bhattacharya, and Boram Yoon) Proceedings of the 38th annual International Symposium on Lattice Field Theory, 26–30 July 2021, Ed. Meifeng Lin.
  31. Electric dipole moments and the search for new physics (Ricardo Alarcon, Jim Alexander, Vassilis Anastassopoulos, Takatoshi Aoki, Rick Baartman, Stefan Baeßler, Larry Bartoszek, Douglas H. Beck, Franco Bedeschi, Robert Berger, Martin Berz, Hendrick L. Bethlem, Tanmoy Bhattacharya, Michael Blaskiewicz, Thomas Blum, Themis Bowcock, Anastasia Borschevsky, Kevin Brown, Dmitry Budker, Sergey Burdin, Brendan C. Casey, Gianluigi Casse, Giovanni Cantatore, Lan Cheng, Timothy Chupp, Vince Cianciolo, Vincenzo Cirigliano, Steven M. Clayton, Chris Crawford, B. P. Das, Hooman Davoudiasl, Jordy de Vries, David DeMille, Dmitri Denisov, Milind V. Diwan, John M. Doyle, Jonathan Engel, George Fanourakis, Renee Fatemi, Bradley W. Filippone, Victor V. Flambaum, Timo Fleig, Nadia Fomin, Wolfram Fischer, Gerald Gabrielse, R. F. Garcia Ruiz, Antonios Gardikiotis, Claudio Gatti, Andrew Geraci, James Gooding, Bob Golub, Peter Graham, Frederick Gray, W. Clark Griffith, Selcuk Haciomeroglu, Gerald Gwinner, Steven Hoekstra, Georg H. Hoffstaetter, Haixin Huang, Nicholas R. Hutzler, Marco Incagli, Takeyasu M. Ito, Taku Izubuchi, Andrew M. Jayich, Hoyong Jeong, David Kaplan, Marin Karuza, David Kawall, On Kim, Ivan Koop, Wolfgang Korsch, Ekaterina Korobkina, Valeri Lebedev, Jonathan Lee, Soohyung Lee, Ralf Lehnert, Kent K. H. Leung, Chen-Yu Liu, Joshua Long, Alberto Lusiani, William J. Marciano, Marios Maroudas, Andrei Matlashov, Nobuyuki Matsumoto, Richard Mawhorter, Francois Meot, Emanuele Mereghetti, James P. Miller, William M. Morse, James Mott, Zhanibek Omarov, Luis A. Orozco, Christopher M. O'Shaughnessy, Cenap Ozben, SeongTae Park, Robert W. Pattie Jr. Alexander N. Petrov, Giovanni Maria Piacentino, Bradley R. Plaster, Boris Podobedov, Matthew Poelker, Dinko Pocanic, V. S. Prasannaa, Joe Price, Michael J. Ramsey-Musolf, Deepak Raparia, Surjeet Rajendran, Matthew Reece, Austin Reid, Sergio Rescia, Adam Ritz, B. Lee Roberts, Marianna S. Safronova, Yasuhiro Sakemi, Philipp Schmidt-Wellenburg, Andrea Shindler, Yannis K. Semertzidis, Alexander Silenko, Jaideep T. Singh, Leonid V. Skripnikov, Amarjit Soni, Edward Stephenson, Riad Suleiman, Ayaki Sunaga, Michael Syphers, Sergey Syritsyn, M. R. Tarbutt, Pia Thoerngren, Rob G. E. Timmermans, Volodya Tishchenko, Anatoly V. Titov, Nikolaos Tsoupas, Spyros Tzamarias, Alessandro Variola, Graziano Venanzoni, Eva Vilella, Joost Vossebeld, Peter Winter, Eunil Won, Anatoli Zelenski, Tanya Zelevinsky, Yan Zhou, and Konstantin Zioutas) Los Alamos report LA-UR-22-22083; ori:oai:arXiv.org:2203.08103 [hep-ph] [inspire].
  32. Recombination and low-diversity confound homoplasy-based methods to detect the effect of SARS-COV-2 mutations on viral transmissinility or Matters Arising. Response to “No evidence for increased transmissibility from recurrent mutations in SARS-CoV-2” by Van Dorp et al. Nature Communication 11:5986 (Nov 25, 2020) (Elena E. Giorgi, Tanmoy Bhattacharya, Will Fischer, Hyejin Yoon, Werner Abfalterer, and Bette Korber) Los Alamos report LA-UR-21-20393. bioRxiv 2021.01.29.428535 ori:doi:10.1101/2021.01.29.428535 Rejected.
  33. Quantum Simulation of Quantum Field Theory with Qubit Models (Alex Buser, Tanmoy Bhattacharya, Shailesh Chandraskharan, Hershdeep Singh, Rajan Gupta) Bulletin of the American Physical Society, 65:1 (2020) Abstract F90.00002; APS March Meeting 2020, Denver, Colorado, USA, 2–6 March 2020.
  34. Nucleon axial form factors from Clover fermions on 2+1+1-flavor HISQ lattice (Yong-Chull Jang, Rajan Gupta, Tanmoy Bhattacharya, Sungwoo Park, Boram Yoon, and Huey-Wen Lin) ori:oai:arXiv.org:2001.11592 [hep-lat] Proceedings of the 37th annual International Symposium on Lattice Field Theory, Wuhan, Hubei, China, 16–22 June 2019, Eds. Heng-Tong Ding and Yi-Bo Yang. Proceedings of Science LATTICE2019 (2020) 131; ori:doi:10.22323/1.363.0131. [inspire]
  35. Nucleon charges and form factors using Clover and HISQ Ensembles (Sungwoo Park, Tanmoy Bhattacharya, Rajan Gupta, Yong-Chull Jang, Balint Joo, Huey-Wen Lin, and Boram Yoon) Los Alamos report LA-UR-19-31873, ori:oai:arXiv.org:2002.02147 [hep-lat] Proceedings of the 37th annual International Symposium on Lattice Field Theory, Wuhan, Hubei, China, 16–22 June 2019, Eds. Heng-Tong Ding and Yi-Bo Yang. Proceedings of Science LATTICE2019 (2020) 136; ori:doi:10.22323/1.363.0136. [inspire]
  36. Neutron Electric Dipole Moments with Clover Fermion (Boram Yoon, Tanmoy Bhattacharya, Vincenzo Cirigliano, and Rajan Gupta) Los Alamos report LA-UR-19-32467, ori:oai:arXiv.org:2003.05390 [hep-lat] Proceedings of the 37th annual International Symposium on Lattice Field Theory, Wuhan, Hubei, China, 16–22 June 2019, Eds. Heng-Tong Ding and Yi-Bo Yang. Proceedings of Science LATTICE2019 (2020) 243; ori:doi:10.22323/1.363.0243. [inspire]
  37. Review of results of recent nucleon structure & matrix element calculations or Recent results of nucleon structure & matrix element calculations (Tanmoy Bhattacharya, Rajan Gupta, and Boram Yoon) Los Alamos report LA-UR-20-21642, ori:oai:arXiv.org:2003.08490 [hep-lat] Proceedings of the 37th annual International Symposium on Lattice Field Theory, Wuhan, Hubei, China, 16–22 June 2019, Eds. Heng-Tong Ding and Yi-Bo Yang. Proceedings of Science LATTICE2019 (2020) 247; ori:doi:10.22323/1.363.0247. [inspire]
  38. Leptonic decays of B(s) and D(s) using the OK action (Sungwoo Park, Tanmoy Bhattacharya, Rajan Gupta, Yong-Chull Jang, Benjamin J. Choi, Seungyeob Jwa, Sunkyu Lee, Weonjong Lee, and Jaehoon Leem (LANL/SWME Collaboration)) ori:oai:arXiv.org:2002.04755 [hep-lat] Proceedings of the 37th annual International Symposium on Lattice Field Theory, Wuhan, Hubei, China, 16–22 June 2019, Eds. Heng-Tong Ding and Yi-Bo Yang. Proceedings of Science LATTICE2019 (2020) 050; ori:doi:10.22323/1.363.0050 [inspire]
  39. Semileptonic B → D*ℓν Decay Form Factors using the Oktay-Kronfeld action (Tanmoy Bhattacharya, Benjamin J. Choi, Rajan Gupta, Yong-Chull Jang, Seungyeob Jwa, Sunkyu Lee, Weonjong Lee, Jaehoon Leem, Sungwoo Park (LANL/SWME Collaboration)) ori:oai:arXiv.org:2003.09206 [hep-lat] Proceedings of the 37th annual International Symposium on Lattice Field Theory, Wuhan, Hubei, China, 16–22 June 2019, Eds. Heng-Tong Ding and Yi-Bo Yang. Proceedings of Science LATTICE2019 (2020) 056; ori:doi:10.22323/1.363.0056 [inspire]
  40. Knows When it Doesn't Know: Deep Abstaining Classifiers (Sunil Thulasidasan, Tanmoy Bhattacharya, Jeffrey Bilmes, Gopinath Chennupati, and Jamal Mohd-Yusof) 7th International Conference on Learning Representations, New Orleans, Lousiana, USA 6–9 May, 2019. Conference Paper 1381. Rejected.
  41. WG1 Summary (Tanmoy Bhattacharya, Hailong Ma, and Rainer Wanke) Proceedings of the 10th International Workshop on the CKM Unitarity Triangle (CKM 2018), Heidelberg, Germany, 17–21 September 2018. Zenodo (February 2019) ori:doi:5281/zenodo.2575614; Published on 14 February 2019; ori:doi:5281/zenodo.2565695.
  42. Uncertainty Quantification Analysis of Data-Driven Models of Cancer Cell Line Response (Jonathan E. Allen, Marian Anghel, Tanmoy Bhattacharya, Thomas Brettin, Jason D. Gans, Cristina Garcia-Cardona, Nicolas W. Hengartner, Sergei Maslov, Rick L. Stevens, and Fangfang Xia) 30th Anniversary American Association for Cancer Research Special Conference—Convergence: Artificial Intelligence, Big Data and Prediction in Cancer, Newport, Rhode Island, USA 14–17 October, 2018. Poster B40.
  43. Do not measure correlated observables, but train an artificial intelligence to predict them (Boram Yoon and Tanmoy Bhattacharya) Proceedings of the 36th annual International Symposium on Lattice Field Theory, Michigan State University, East Lansing, Michigan, USA, 22–28 July 2018. Proceedings of Science LATTICE2018 (2019) Unpublished
  44. Neutron Electric Dipole Moment from Beyond the Standard Model or nEDM from BSM (Tanmoy Bhattacharya, Boram Yoon, Rajan Gupta, and Vincenzo Cirigliano) Los Alamos report LA-UR-18-31631, ori:oai:arXiv.org:1812.06233 [hep-lat] Proceedings of the 36th annual International Symposium on Lattice Field Theory, Michigan State University, East Lansing, Michigan, USA, 22–28 July 2018. Proceedings of Science LATTICE2018 (2019) 188; ori:doi:10.22323/1.334.0188. [inspire]
  45. Isovector and flavor diagonal charges of the nucleon from 2+1+1 flavor QCD (Rajan Gupta, Tanmoy Bhattacharya, Vincenzo Cirigliano, Boram Yoon, Yong-Chull Jang, and Huey-Wen Lin (Precision Neutron Decay Matrix Element (PNDME) Collaboration) Los Alamos report LA-UR-18-30962, ori:oai:arXiv.org:1812.03573 [hep-lat] Proceedings of the 36th annual International Symposium on Lattice Field Theory, Michigan State University, East Lansing, Michigan, USA, 22–28 July 2018. Proceedings of Science LATTICE2018 (2019) 131; ori:doi:10.22323/1.334.0131. [inspire]
  46. Update on B → D*ℓ ν form factor at zero-recoil using the Oktay-Kronfeld action (Tanmoy Bhattacharya, Rajan Gupta, Sungwoo Park, Yong-Chull Jang, Jon A. Bailey, Benjamin J. Choi, Hwancheol Jeong, Seungyeob Jwa, Sunkyu Lee, Weonjong Lee, Jeongwhan Pak, and Jaehoon Leem (LANL/SWME Collaboration)) ori:oai:arXiv.org:1812.07675 [hep-lat] Proceedings of the 36th annual International Symposium on Lattice Field Theory, Michigan State University, East Lansing, Michigan, USA, 22–28 July 2018. Proceedings of Science LATTICE2018 (2019) 283; ori:doi:10.22323/1.334.0283. [inspire]
  47. Updates on Nucleon Form Factors from Clover-on-HISQ Lattice Formulation (Yong-Chull Jang, Tanmoy Bhattacharya, Rajan Gupta, Huey-Wen Lin, and Boram Yoon (Precision Neutron Decay Matrix Element (PNDME) Collaboration) Los Alamos report LA-UR-19-20696, ori:oai:arXiv.org:1901.00060 [hep-lat] Proceedings of the 36th annual International Symposium on Lattice Field Theory, Michigan State University, East Lansing, Michigan, USA, 22–28 July 2018. Proceedings of Science LATTICE2018 (2019) 123; ori:doi:10.22323/1.334.0123. [inspire]
  48. Uncertainty Quantification: Characterizing the Sources of Error in Automated Information Extraction from Pathology Reports (Benjamin McMahon, Kumkum Ganguly, Nicolas Hengartner, Xiao-Cheng Wu, Lynne Penberthy, Blair Christian, and Tanmoy Bhattacharya) North American Association for Central Cancer Registries Annual Conference 2018, Pittsburgh, Pennsylvania, USA 9–14 June, 2018. Presentation 1C1.
  49. Using SEER Data to Develop Synthetic Cancer Trajectories that Enable Cancer Research (Sarah Michalak, Nicolas Hengartner, Kumkum Ganguly, Ben McMahon, Tanmoy Bhattacharya, Blair Christian, Paul Fearn, Donna Rivera, Xiao-Cheng Wu, and Lynne Penberthy) North American Association for Central Cancer Registries Annual Conference 2018, Pittsburgh, Pennsylvania, USA 9–14 June, 2018. Presentation 4B1.
  50. Extracting Breast Cancer Genetic Markers in Pathology Reports using Natural Language Processing (Gopinath Chennupati, Kumkum Ganguly, Benjamin McMahon, Sunil Thulasidasan, Jessica Boten, Valentina Petkov, Lynne Penberthy, Xiao-Cheng Wu, Paul Fearn, and Tanmoy Bhattacharya) North American Association for Central Cancer Registries Annual Conference 2018, Pittsburgh, Pennsylvania, USA 9–14 June, 2018. Presentation 4E4.
  51. Nucleon Axial and Electromagnetic Form Factors (Yong-Chull Jang, Tanmoy Bhattacharya, Rajan Gupta, Huey-Wen Lin, and Boram Yoon) Los Alamos report LA-UR-18-20435, ori:oai:arXiv.org:1801.01635 [hep-lat] Proceedings of the 35th International Symposium on Lattice Field Theory, Granada, Spain, 18–24 June 2017. European Physics Journal Web of Conferences 175 (2018) 06033; ori:doi:10.1051/epjconf/201817506033. [inspire]
  52. Isovector and flavor-diagonal charges of the nucleon (Rajan Gupta, Tanmoy Bhattacharya, Yong-Chull Jang, Huey-Wen Lin, and Boram Yoon) Los Alamos report LA-UR-17-31334, ori:oai:arXiv.org:1801.03130 [hep-lat] Proceedings of the 35th International Symposium on Lattice Field Theory, Granada, Spain, 18–24 June 2017. European Physics Journal Web of Conferences 175 (2018) 06029; ori:doi:10.1051/epjconf/201817506029. [inspire]
  53. Neutron Electric Dipole Moment on the Lattice (Boram Yoon, Tanmoy Bhattacharya, and Rajan Gupta) Los Alamos report LA-UR-17-29935, ori:oai:arXiv.org:1712.08557 [hep-lat] Proceedings of the 35th International Symposium on Lattice Field Theory, Granada, Spain, 18–24 June 2017. European Physics Journal Web of Conferences 175 (2018) 01014; ori:doi:10.1051/epjconf/201817501014. [inspire]
  54. Calculation of B̄→D*ℓ ν̄ form factor at zero recoil using the Oktay-Kronfeld action (Jon A. Bailey, Tanmoy Bhattacharya, Rajan Gupta, Yong-Chull Jang, Weonjong Lee, Jae-hoon Leem, Sungwoo Park, and Boram Yoon (LANL-SWME Collaboration)) ori:oai:arXiv.org:1711.01786 [hep-lat] Proceedings of the 35th International Symposium on Lattice Field Theory, Granada, Spain, 18–24 June 2017. European Physics Journal Web of Conferences 175 (2018) 13012; ori:doi:10.1051/epjconf/201817513012. [inspire]
  55. Quantifying uncertainty in the inference of generalized coalescents (Timothy C. Wallstrom, Tanmoy Bhattacharya, and Jon F. Wilkins) Los Alamos report LA-UR-16-27366. bioRxiv 150342 ori:doi:10.1101/150342
  56. Surveillance in an Era of Emerging Technology and Precision Medicine (Tanmoy Bhattacharya) North American Association for Central Cancer Registries Annual Conference 2018, Albuquerque, New Mexico, USA 16–23 June, 2017. Plenary Presentation 4PL2.
  57. The Contribution of Novel CP Violation to the nEDM using Lattice QCD (Rajan Gupta, Tanmoy Bhattacharya, Vincenzo Cirigliano, and Boram Yoon) Los Alamos report LA-UR-16-29579, ori:oai:arXiv.org:1701.04132 [hep-lat] Proceedings of the XIIth Conference on Quark Confinement and the Hadron Spectrum (Confinement XII), Thessaloniki, Greece, 28 Aug–2 Sep 2016. European Physics Journal Web of Conferences 137 (2017) 08007; ori:doi:10.1051/epjconf/201713708007. [inspire]
  58. Quark Chromoelectric Dipole Moment Contribution to the Neutron Electric Dipole Moment (Tanmoy Bhattacharya, Vincenzo Cirigliano, Rajan Gupta, and Boram Yoon) Los Alamos report LA-UR-16-29167, ori:oai:arXiv.org:1612.08438 [hep-lat] Proceedings of the 34th annual International Symposium on Lattice Field Theory, University of Southampton, UK, 24–30 July 2016. Proceedings of Science LATTICE2016 (2017) 225; ori:doi:10.22323/1.256.0225 [inspire]
  59. Nucleon Vector and Axial-Vector Form Factors (Yong-Chull Jang, Tanmoy Bhattacharya, Rajan Gupta, Boram Yoon, and Huey-Wen Lin (Precision Neutron Decay Matrix Element (PNDME) Collaboration) Proceedings of the 34th annual International Symposium on Lattice Field Theory, University of Southampton, UK, 24–30 July 2016. Proceedings of Science LATTICE2016 (2017) 178; ori:doi:10.22323/1.256.0178 [inspire]
  60. Tuning the hopping parameter in the Oktay-Kronfeld action for charm and bottom quarks on a MILC HISQ ensemble (Hwancheol Jeong, Weonjong Li, Jaehoon Leem, Sungwoo Park, Tanmoy Bhattacharya, Rajan Gupta, and Yong-Chull Jang (LANL-SWME Collaboration)) Los Alamos report LA-UR-17-20003, ori:oai:arXiv.org:1612.05707 [hep-lat] Proceedings of the 34th annual International Symposium on Lattice Field Theory, University of Southampton, UK, 24–30 July 2016. Proceedings of Science LATTICE2016 (2017) 380; ori:doi:10.22323/1.256.0380 [inspire]
  61. Lattice QCD calculations of transverse momentum-dependent parton distributions (TMDs). (M. Engelhardt, B. Musch, T. Bhattacharya, J.R. Green, R. Gupta, P. Hägler, S. Krieg, J. Negele, A. Pochinsky, A. Schäfer, S. Syritsyn, B. Yoon) Proceedings of the 6th International Conference on Physics Opportunities at an ElecTron-Ion Collider, Palaiseau, France, 7–11 September 2015. European Physics Journal Web of Conferences 112 (2016) 01008; ori:doi:10.1051/epjconf/201611201008 Published 21 Mar 2016. [inspire]
  62. Lattice QCD Calculations of Nucleon Transverse Momentum-Dependent Parton Distributions using Clover and Domain Wall Fermions. (Boram Yoon, T. Bhattacharya, M. Engelhardt, J. Green, R. Gupta, P. Hägler, S. Meinel, B.U. Musch, J. Negele, A. Pochinsky, S. Syritsyn) ori:oai:arXiv.org:1601.05717 [hep-lat] Proceedings of the 33rd International Symposium on Lattice Field Theory, Kobe, Japan, 14–18 July 2015. Proceedings of Science LATTICE 2015 (2016) 116; ori:doi:10.22323/1.251.0116 [inspire]
  63. Neutron Electric Dipole Moment from quark Chromoelectric Dipole Moment. (Tanmoy Bhattacharya, Vincenzo Cirigliano, Rajan Gupta, Emmanuele Mereghetti, and Boram Yoon) Los Alamos report LA-UR-15-29401, ori:oai:arXiv.org:1601.02264 [hep-lat] Proceedings of the 33rd International Symposium on Lattice Field Theory, Kobe, Japan, 14–18 July 2015. Proceedings of Science LATTICE 2015 (2016) 238; ori:doi:10.22323/1.251.0238 [inspire]
  64. Nucleon Charges, Form-factors and Neutron EDM. (Rajan Gupta, Tanmoy Bhattacharya, Vincenzo Cirigliano, Huey-Wen Lin, Boram Yoon) Los Alamos report LA-UR-15-28920, ori:oai:arXiv.org:1601.01730 [hep-lat] Proceedings of the 33rd International Symposium on Lattice Field Theory, Kobe, Japan, 14–18 July 2015. Proceedings of Science LATTICE 2015 (2016) 130; ori:doi:10.22323/1.251.0130 [inspire]
  65. Aspects of Lattice QCD Calculations of Transverse Momentum-Dependent Parton Distributions. (M. Engelhardt, B. Musch, T. Bhattacharya, J.R. Green, R. Gupta, P. Hägler, S. Krieg, J. Negele, A. Polchinsky, A. Schäfer, S. Syritsyn, and B. Yoon) Proceedings of the QCD Evolution 2015, Jefferson Lab, Newport News, Virgina, USA, 26–30 May 2015. Proceedings of Science QCDEV2015 (2016) 18; ori:doi:10.22323/1.249.0018 [inspire]
  66. Lattice QCD calculations of nucleon transverse momentum-dependent parton distributions (TMDs) at 170 MeV pion mass. (M. Engelhardt, B. Musch, T. Bhattacharya, R. Gupta, P. Hägler, S. Krieg, J. Negele, A. Polchinsky, A. Schäfer, S. Syritsyn, and B. Yoon) Proceedings of the 33rd International Symposium on Lattice Field Theory, Kobe, Japan, 14–18 July 2015. Proceedings of Science LATTICE 2015 (2016) 117; ori:doi:10.22323/1.251.0117 [inspire]
  67. Nucleon transverse momentum-dependent parton distributions from domain wall fermion calculations at 297 MeV pion mass. (Michael Engelhardt, Bernhard Musch, Tanmoy Bhattacharya, Rajan Gupta, Phillip Hägler, John Negele, Andrew Polchinsky, Andreas Schäfer, Sergey Syritsyn, and Boram Yoon) Los Alamos report LA-UR-14-29420, Jefferson Lab report JLAB-THY-14-1971. Proceedings of the 32nd International Symposium on Lattice Field Theory, New York, New York, USA, 23–28 June 2014. Proceedings of Science LATTICE2014 (2015) 167; ori:doi:10.22323/1.214.0167 [inspire]
  68. The QCD Equation of State. (Tanmoy Bhattacharya for HotQCD) Los Alamos report LA-UR-14-29319. ori:oai:arXiv.org:1501.07652 [hep-lat] Proceedings of the 32nd International Symposium on Lattice Field Theory, New York, New York, USA, 23–28 June 2014. Proceedings of Science LATTICE2014 (2015) 225; ori:doi:10.22323/1.214.0225 [inspire]
  69. Precision calculations of nucleon charges gA, gS, gT. (Rajan Gupta, Tanmoy Bhattacharya, Boram Yoon, Anosh Joseph, and Huey-Wen Lin) Los Alamos report LA-UR-14-29293. ori:oai:arXiv.org:1501.07639 [hep-lat] Proceedings of the 32nd International Symposium on Lattice Field Theory, New York, New York, USA, 23–28 June 2014. Proceedings of Science LATTICE2014 (2015) 152; ori:doi:10.22323/1.214.0152 [inspire]
  70. Disconnected Quark Loop Contributions to Nucleon Structure. (Tanmoy Bhattacharya, Rajan Gupta, and Boram Yoon) Los Alamos report LA-UR-14-28704. ori:oai:arXiv.org:1503.05975 [hep-lat] Proceedings of the 32nd International Symposium on Lattice Field Theory, New York, New York, USA, 23–28 June 2014. Proceedings of Science LATTICE2014 (2015) 141; ori:doi:10.22323/1.214.0141 [inspire]
  71. Complex Impact of Reversion Mutations and CD8+ T Cell Escape Mutations on HIV-1 Fitness (Hongshuo Song, Tanmoy Bhattacharya, Nilu Goonetilleke, Kevin Wiehe, Andrew McMichael, George Shaw, Beatrice Hahn, Alan Perelson, Barton Haynes, and Feng Gao) Abstract 369 at the Conference on Retroviruses and Opportunistic Infections (CROI), Boston, Massachusetts, USA, 3–6 March 2014.
  72. Probing TeV Physics through Lattice Neutron-Decay Matrix Elements. (Huey-Wen Lin, Tanmoy Bhattacharya, Saul D. Cohen, Rajan Gupta, Anosh Joseph, Boram Yoon) Proceedings of the 2013 International Workshop on Computational Science and Engineering, Taipei, Taiwan, 14–17 October 2013. Proceedings of Science IWCSE2013 (2014) 055; ori:doi:10.22323/1.202.0055 [inspire]
  73. Probing TeV scale physics in precision UCN decays. (Rajan Gupta, Tanmoy Bhattacharya, Anosh Joseph, Saul D. Cohen, and Huey-Wen Lin) Los Alamos report LA-UR-13-29020. ori:oai:arXiv.org:1403.2447 [hep-lat] Proceedings of the 31st International Symposium on Lattice Field Theory, Mainz, Germany, 2013. Proceedings of Science LATTICE 2013 (2013) 409; ori:doi:10.22323/1.187.0409 [inspire]
  74. Neutron Electric Dipole Moments from Beyond the Standard Model Physics. (Tanmoy Bhattacharya, Vincenzo Cirigliano, Rajan Gupta) Los Alamos report LA-UR-13-28859 November 2013. ori:oai:arXiv.org:1403.2445 [hep-lat] Proceedings of the 31st International Symposium on Lattice Field Theory, Mainz, Germany, 2013. Proceedings of Science LATTICE 2013 (2013) 299; ori:doi:10.22323/1.187.0299 [inspire]
  75. Probing novel TeV physics through precision calculations of scalar and tensor charges of the nucleon. (Rajan Gupta, Tanmoy Bhattacharya, Anosh Joseph, Saul Cohen, and Huey-Wen Lin) Los Alamos report LA-UR-12-26832 December 2012. ori:oai:arXiv.org:1212.4889 [hep-lat] Proceedings of the 30th International Symposium on Lattice Field Theory, Cairns, Australia, 2012. Eds. Leinweber, et al. Proceedings of Science Lattice 2012 (2012) 114; ori:doi:10.22323/1.164.0114 [inspire]
  76. Neutron Electric Dipole Moment from Beyond the Standard Model. (Tanmoy Bhattacharya, Vincenzo Cirigliano, and Rajan Gupta) Los Alamos report LA-UR-12-26831 December 2012. ori:oai:arXiv.org:1212.4918 [hep-lat] Proceedings of the 30th International Symposium on Lattice Field Theory, Cairns, Australia, 2012. Eds. Leinweber, et al. Proceedings of Science Lattice 2012 (2012) 179; ori:doi:10.22323/1.164.0179 [inspire]
  77. The Chiral Transition, Deconfinement, and the Equation of State of QCD (Frithjof Karsch, Wolfgang Söldner, A. Bazavov, T. Bhattacharya, M. Cheng, C. DeTar, H.-T. Ding, Steven Gottlieb, R. Gupta, P. Hegde, U.M. Heller, E. Laermann, L. Levkova, S. Mukherjee, P. Petreczky, C. Schmidt, R.A. Soltz, R. Sugar, D. Toussaint, W. Unger, and P. Vranas) Proceedings of the NIC Symposium, 2012. 18, 15.
  78. Worldline Method for Electromagnetic Casimir Energies. (Jonathan Mackrory, Tanmoy Bhattacharya, and Daniel Steck) 43rd Annual Meeting of the APS Division of Atomic, Molecular and Optical Physics, Orange County, California, June 4–8 2012. Bulletin of the American Physical Society 57:5 (2012) BAPS.2012.DAMOP.D1.153.
  79. Probing TeV scale physics via ultra cold neutron decays and calculating non-standard baryon matrix elements (Rajan Gupta, Tanmoy Bhattacharya, Anosh Joseph, Huey-Wen Lin, and Saul D. Cohen) Los Alamos report LA-UR-12-10238 February 2012. ori:oai:arXiv.org:1202.1320 [hep-lat] Proceedings of the 29th International Symposium on Lattice Field Theory, Squaw Valley, Lake Tahoe, California, USA, 2011. Eds. Juge, et al. Proceedings of Science LATTICE 2011 (2011) 271; ori:doi:10.22323/1.139.0271 [inspire]
  80. Theoretical Bounds on New Four-Fermion Interactions and TeV Scale Physics (Tanmoy Bhattacharya, Rajan Gupta, Anosh Joseph, Huey-Wen Lin, and Saul D. Cohen) Los Alamos report LA-UR-12-20294 March 2012. ori:oai:arXiv.org:1203.6843 [hep-lat] Proceedings of the 29th International Symposium on Lattice Field Theory, Squaw Valley, Lake Tahoe, California, USA, 2011. Eds. Juge, et al. Proceedings of Science LATTICE 2011 (2011) 272; ori:doi:10.22323/1.139.0272 [inspire]
  81. Probing TeV Physics through Lattice Neutron-Decay Matrix Elementa (Huey-Wen Lin, Saul D. Cohen, Tanmoy Bhattacharya, Rajan Gupta, and Anosh Joseph) Proceedings of the 29th International Symposium on Lattice Field Theory, Squaw Valley, Lake Tahoe, California, USA, 2011. Eds. Juge, et al. Proceedings of Science LATTICE 2011 (2011) 273; ori:doi:10.22323/1.139.0273 [inspire]
  82. Genital tract sequestration of SIV during acute infection (James B. Whitney, Peter Hraber, Corinne Luedemann, Tanmoy Bhattacharya, Srinivas S. Rao, John R. Mascola, Bette T. Korber, Gary J. Nabel, and Norman L. Letvin) Journal of Medical Primatology 40:4 (2011) 283. in ori:doi:10.1111/j.1600-0684.2011.00491.x
  83. Computationally identified mutations suspected to cause gp120 charge inversion and gp41-mediated allosteric effects impact IgG1b12 suspectibility. (A.R. Geonnotti, S. Gnanakaran, M.G. Daniels, T. Bhattacharya, A.S. Lapedes, B. Korber, and D.C. Montefiori) Abstracts from AIDS Vaccine 2010, Atlanta, Georgia, USA 28 September–1 October, 2010. Published in AIDS Research and Human Retroviruses 26:10 (Oct 15, 2010) A-1-A-184 ori:doi:10.1089/aid.2010.9998
  84. The HotQCD Collaboration (A. Bazavov, T. Bhattacharya, M. Cheng, N.H. Christ, C. DeTar, S. Ejiri, Steven Gottlieb, R. Gupta, U.M. Heller, K. Huebner, C. Jung F. Karsch E. Laermann L. Levkova C. Miao R.D. Mawhinney P. Petreczky C. Schmidt R.A. Soltz W. Soeldner R. Sugar D. Toussaint P. Vranas) Proceeding of Quark Matter 2009—21st International Conference on Ultrarelativistic Nucleus-Nucleus Collision, Nuclear Physics A830:1–4 (2009) 958c; ori:doi:10.1016/j.nuclphysa.2009.10.149. Available online 10 November 2009
  85. Quantifying semantic shift for reconstructing language families (W. Croft, C. Beckner, L. Sutton, J. Wilkins, T. Bhattacharya, and D. Hruschka) Poster presented at the 83rd Annual meeting of the Lingustics Society of America, San Francisco, California, USA, 2009. Unpublished
  86. Age-structured Stochastic Model of Intrapatient HIV Evolution (Elena E Giorgi, Alan S Perelson, and (Tanmoy Bhattacharya) 3rd q-bio Conference c2.016
  87. P09-21. Deep sequencing of HIV-1 from acute infection: low initial diversity, and rapid but variable CTL escape. (W. Fischer, B. Keele, T. Bhattacharya, C. Lo, E. Giorgi, P. Hraber, T. Leitner, C. Han, C. Gleasner, L. Green, B. Hahn, G. Shaw, B. Haynes, and B. Korber) Abstracts from AIDS Vaccine 2009, 19–22 October, 2009. Retrovirology 6:Suppl 3 (2009) P401 ori:doi:10.1186/1742-4690-6-S3-P401
  88. P04-54. Genetic signature analysis identifies the CD4i region of gp120 as a determinant of broadly NAb responses in HIV-1-infected individuals. (S. Gnanakaran, T. Bhattacharya, M. Daniels, A. Lapedes, F. Gao, A. Kumar, M. Li, H. Tang, K. Greene, H. Gao, M. Seaman, B.F. Haynes, D.C. Montefiori, B.T. Korber) Abstracts from AIDS Vaccine 2009, 19–22 October, 2009. Retrovirology 6:Suppl 3 (2009) P394 ori:doi:10.1186/1742-4690-6-S3-P394
  89. The Petaflops Router: Harnessing FPGAs and Accelerators for High Performance Computing (Zachary K. Baker, Tanmoy Bhattacharya, Mark Dunham, Paul S. Graham, Rajan Gupta, Jeff Inman, Andreas Klein, Gerd J. Kunde, Al McPherson, Matt Stettler, and Justin L. Tripp) Proceedings of the Thirteenth Annual Workshop of High Performance Embedded Computing (HPEC 2009), Lexington, Massachusetts, USA, 22 September 2009. Poster A.4.
  90. 017. Low dose rectal inoculation of rhesus macaques by SIVsmE660 or SIVmac251 recapitulates human mucosal infection by HIV-1 (Brandon Keele, Hui Li, Elena Giorgi, Peter Hraber, Chuanxi Sun, Truman Grayson, Wendy Yeh, Tanmoy Bhattacharya, Bette Korber, Barton Haynes, Gary Nabel, Norman Letvin, Beatrice Hahn and George Shaw) Abstracts from 26th Annual Symposium of Nonhuman Primate Models for AIDS. Journal of Medical Primatology 38:Suppl. 1 (2009) 57. Part of ori:doi:10.1111/j.1600-0684.2009.00376.x
  91. Computational Approaches to Viral Evolution and Rational Vaccine Design (Tanmoy Bhattacharya) American Physical Society, Four Corners Section of the APS Fall Meeting, October 6–7 2006 Abstract number #B1.001
  92. Rational design of HCV vaccine cocktails that maximize coverage of potential CTL epitopes (K Yusim, W Fischer, S Perkins, T Bhattacharya, J Theiler, T Allen, G Lauer, B Korber, and C Kuiken) Abstracts from the 12th International Symposium on Viral Hepatitis and Liver Disease, Paris, France, July 1–5, 2006. Journal of Clinical Virology 36:suppl.2 (Jul 2006) S164—S165. ori:doi:10.1016/S1386-6532(06)80511-1
  93. HLA-associated sequence polymorphisms in HCV reveal the reproducibility of immune responses and constraints on viral evolution. (J Timm, B Li, T Bhattacharya, MG Daniels, LL Reyor, R Allgaier, T Kuntzen, W Fischer, J Duncan, J Schulze zur Wiesch, A Kim, N Frahm, C Brander, RT Chung, GM Lauer, BT Korber, BD Walker, and TM Allen) Abstracts from the 12th International Symposium on Viral Hepatitis and Liver Disease, Paris, France, July 1–5, 2006. Journal of Clinical Virology 36:suppl.2 (Jul 2006) S119—S120. ori:doi:10.1016/S1386-6532(06)80371-9
  94. Chiral lattice gauge theories from warped domain walls and Ginsparg-Wilson fermions (Tanmoy Bhattacharya, Matthew R. Martin, Erich Poppitz) Los Alamos report LA-UR-06-7328 October 2006. Proceedings of the 24th International Symposium on Lattice Field Theory, Tucson, Arizona, USA, 2006. Eds. Morningstar, et al. Proceedings of Science LAT2006 (2006) 048; ori:doi:10.22323/1.032.0048 [inspire]
  95. Towards a chiral gauge theory by deconstruction in AdS5 (Tanmoy Bhattacharya, Rajan Gupta, Matthew R. Martin, Yuri Shirman, Csaba Csáki, and John Terning) Los Alamos report LA-UR-05-7739 October 2005. ori:oai:arXiv.org:hep-lat/0510073 Proceedings of the 23rd International Symposium on Lattice Field Theory, Dublin, Ireland, 2005. Eds. Michael, et al. Proceedings of Science LAT2005 (2005) 136; ori:doi:10.22323/1.020.0136 [inspire]
  96. Chaos and Quantum Mechanics (Salman Habib, Tanmoy Bhattacharya, Benjamin Greenbaum, Kurt Jacobs, Kosuke Shizume, and Bala Sundaram), Los Alamos report LA-UR-05-2905, April 2005. ori:oai:arXiv.org:quant-ph/0505085 Proceedings of the 16th Florida Workshop in Nonlinear Astronomy and Physics; 2004. Eds. Gottesman, et al., ‘Nonlinear Dynamics in Astronomy and Physics: In Memory of Henry Kandrup,’ Annals of the New York Academy of Sciences 1045 (2005) 308–332; ori:doi:10.1196/annals.1350.026; pmid: 15980320.
  97. Nonlinear Quantum Dynamics (Salman Habib, Tanmoy Bhattacharya, Benjamin Greenbaum, Andrew Doherty, Benjamin Greenbaum, Asa Hopkins, Kurt Jacobs, Hideo Mabuchi, and Keith Schwab, Kosuke Shizume, Daniel A. Steck, and Bala Sundaram), Los Alamos report LA-UR-05-0368, August 2004. ori:oai:arXiv.org:quant-ph/0505046 NATO Advanced Research Workshop, Nonlinear Dynamics and Fundamental Interactions, Tashkent, October, 2004.
  98. Calculating ε'/ε Using HYP staggered fermions. (T. Bhattacharya, G.T. Fleming, R. Gupta, G. Kilcup, W. Lee, and S. Sharpe), Seoul National University report SNUTP-04-015, Los Alamos report LA-UR-04-5236, August 2004. ori:oai:arXiv.org:hep-lat/0409046 Proceedings of the 22nd International Symposium on Lattice Field Theory, Batavia, Illinois, USA, 2003. Eds. Bodwin, et al., Nuclear Physics (Proceedings Supplement) B140 (2005) 369–371; ori:doi:10.1016/j.nuclphysbps.2004.11.256. [inspire]. 14 citations as of Apr 13, 2011.
  99. Calculating weak matrix elements using HYP fermions. (T. Bhattacharya, G. T. Fleming, G. Kilcup, R. Gupta, W. Lee, and S. Sharpe), Los Alamos report LA-UR-03-6654, Seoul National University report SNUTP-03-020, and University of Washington report UW-PT 03-19, September 2003. ori:oai:arXiv.org:hep-lat/0309105 Proceedings of the 21st International Symposium on Lattice Field Theory, Tsukuba, Japan, 2003. Eds. S. Aoki, et al., Nuclear Physics (Proceedings Supplement) B129&130 (2004) 257–259; ori:doi:10.1016/S0920-5632(03)02547-7. [inspire]. 4 citations as of Apr 13, 2011.
  100. Improved bilinears in unquenched lattice QCD. (Tanmoy Bhattacharya, Rajan Gupta, Weonjong Lee, Stephen R. Sharpe, and Jackson M.S. Wu), Los Alamos report LA-UR-03-6623, Seoul National University report SNUTP-03-019, and University of Washington report UW-PT 03-12, September 2003. ori:oai:arXiv.org:hep-lat/0309087 Proceedings of the 21st International Symposium on Lattice Field Theory, Tsukuba, Japan, 2003. Eds. S. Aoki, et al., Nuclear Physics (Proceedings Supplement) B129&130 (2004) 441–443; ori:doi:10.1016/S0920-5632(03)02608-2. [inspire]. 2 citations as of Apr 13, 2011.
  101. Recovering classical chaotic dynamics from coupled quantum systems through continuous measurements (Paul M Alsing, Shohini Ghose, Ivan Deutsch, Salman Habib, Tanmoy Bhattacharya, and Kurt Jacobs) 34th Meeting of the Division of Atomic, Molecular and Optical Physics, Boulder, Colorado, USA, May 20–24 2003 Abstract number #H5.009
  102. Quantum And Classical Dynamics Of Atoms In A Magneto-optical Lattice. (Shohini Ghose, Paul M. Alsing, Ivan H. Deutsch, Poul S. Jessen, David L. Haycock, Tanmoy Bhattacharya, Salman Habib, and Kurt Jacobs) ori:oai:arXiv.org:quant-ph/0210131. Proceedings of the 7th Experimental Chaos Conference, San Diego, California, USA, 2002, Eds. Visarath In, et al., AIP Conference Proceedings 676 (2003) 283–294; ori:doi:10.1063/1.1612224.
  103. Progress report on staggered ε'/ε project. (T. Bhattacharya, G. T. Fleming, G. Kilcup, R. Gupta, W. Lee, and S. Sharpe) Seoul National University report SNUTP-02-028, August 2002. ori:oai:arXiv.org:hep-lat/0208050. Proceedings of the 20th International Symposium on Lattice Field Theory, Boston, Massachusetts, USA, 2002, Eds. M. Edwards, et al., Nuclear Physics (Proceedings Supplement) B119 (2003) 428–430; ori:doi:10.1016/S0920-5632(03)01576-7; [inspire]. 3 citations as of Apr 13, 2011.
  104. Preface (T. Bhattacharya and N. Cooper) to Los Alamos Science 27 (2002) x–xxii
  105. Emergence of Classical Dynamics in a Quantum World. (T. Bhattacharya, S. Habib, and K. Jacobs) Los Alamos report LA-UR-02-0786, March 2002. ori:oai:arXiv.org:quant-ph/0407096 Los Alamos Science 27 (2002) 110–125
  106. Recovering the Classical Limit of a System with Spin via Continuous Measurement. (Shohini Ghose, Ivan Deutsch, Paul Alsing, Kurt Jacobs, Tanmoy Bhattacharya, and Salman Habib) Proceedings of American Physical Society, 2002 Division of Atomic, Molecular, and Optical, Abstract #L4.004
  107. Tracking the Worldwide Subtype C Epidemic (C Kuiken, UR Smith, D Lang, T Bhattacharya) 9th Conference on Retroviruses and Opportunistic Infections, Seattle, Washington, USA, February 24–28 2002 Abstract number 18 (N45e)
  108. Scaling Behavior of Improvement and Renormalization Constants. (T. Bhattacharya, R. Gupta, W. Lee, and S. Sharpe) Los Alamos report LA-UR-01-5861, November 2001. ori:oai:arXiv.org:hep-lat/0111001 Proceedings of the 19th International Symposium on Lattice Field Theory, Berlin, Germany, 2001, Eds. M. Müller-Preussker, et al., Nuclear Physics (Proceedings Supplement) B106-107 (2002) 789–791; ori:doi:10.1016/S0920-5632(01)01844-8. [inspire]. 22 citations as of Apr 13, 2011.
  109. The Evolutionary and Biogeographic History of HIV-1 Subtype C (UR Smith, CL Kuiken, T Bhattacharya) Los Alamos report LA-UR-01-4292, 2001. AIDS vaccine 2001, Philadelphia, Pennsylvania, USA, September 5–8 2001 Abstract number 264 (Page 112)
  110. Weak Matrix Elements for CP Violation. (T. Bhattacharya, G.T. Fleming, G. Kilcup, R. Gupta, W. Lee, and S. Sharpe) Los Alamos report LA-UR-01-5951, November 2001. ori:oai:arXiv.org:hep-lat/0111004 Proceedings of the 19th International Symposium on Lattice Field Theory, Berlin, Germany, 2001, Eds. M. Müller-Preussker, et al., Nuclear Physics (Proceedings Supplement) B106-107 (2002) 311–313; ori:doi:10.1016/S0920-5632(01)01698-X. [inspire]. 21 citations as of Apr 13, 2011.
  111. Renormalization Constants using Quark States in Landau gauge. (T. Bhattacharya, R. Gupta, and W. Lee) Los Alamos report LA-UR-01-5950, November 2001. ori:oai:arXiv.org:hep-lat/0111002 Proceedings of the 19th International Symposium on Lattice Field Theory, Berlin, Germany, 2001, Eds. M. Müller-Preussker, et al., Nuclear Physics (Proceedings Supplement) B106-107 (2002) 786–788; ori:doi:10.1016/S0920-5632(01)01843-6. [inspire]. 3 citations as of Apr 13, 2011.
  112. Renormalization Constants using Quark States in Fixed Gauge. (T. Bhattacharya, R. Gupta, and W. Lee) Los Alamos report LA-UR-01-0355, June 2001. ori:oai:arXiv.org:hep-lat/0106007 Proceedings of the 18th International Symposium on Lattice Field Theory, Bangalore, India, 2000, Eds. T. Bhattacharya, et al., Nuclear Physics (Proceedings Supplement) B94 (2001) 595–598; ori:doi:10.1016/S0920-5632(01)00874-X. [inspire]. 1 citation as of Apr 13, 2011.
  113. Continuous measurement and the classical limit of the motion of an atom in a magneto-optical double-well potential. (S. Ghose, P.M. Alsing, I.H. Deutsch, K. Jacobs, T. Bhattacharya, S. Habib) Proceedings of the Quantum Electronics and Laser Science Conference. May 11, 2001, Baltimore, MD, USA Conference Edition-6 91–92. ori:doi:10.1109/QELS.2001.961897.
  114. Detailed analysis of the evolution of HIV-1 subtype C (C Kuiken, BT Korber, B Foley, and T Bhattacharya) Proceedings of the 2000 International Meeting of Institute of Human Virology, Baltimore, Maryland, USA, 2000. Journal of Human Virology 3:5 (Sep–Oct 2000) 272.
  115. Improvement and Renormalization Constants in O(a) Improved Lattice QCD. (T. Bhattacharya, R. Gupta, W. Lee, and S. Sharpe) Los Alamos report LA-UR-00-5683, August 2000. ori:oai:arXiv.org:hep-lat/0101007 Proceedings of the 18th International Symposium on Lattice Field Theory, Bangalore, India, 2000, Eds. T. Bhattacharya, et al., Nuclear Physics (Proceedings Supplement) B94 (2001) 599–602; ori:doi:10.1016/S0920-5632(01)00935-5. [inspire].
  116. Timing the origin of the HIV-1 pandemic (B Korber, M Muldoon, J Theiler, F Gao, R Gupta, A Lapedes, BH Hahn, S Wolinsky, and T Bhattacharya) 7th Annual Conference on Retroviruses and Opportunisitic Infections, San Francisco, California, USA, June 2000.
  117. Fixed-point Pure Gauge Action using b = √3 RGT. (T. Bhattacharya, R. Gupta, and W. Lee) Los Alamos report LA-UR-99-4709, October 1999. ori:oai:arXiv.org:hep-lat/9910046 Proceedings of the 17th International Symposium on Lattice Field Theory, Pisa, Italy, 1999, Eds. M. Campostrini, et al., Nuclear Physics (Proceedings Supplement) B83-84 (2000) 860–862; ori:doi:10.1016/S0920-5632(00)91827-9. [inspire]. 3 citations as of Apr 13, 2011.
  118. Order a Improved Renormalization Constants. (T. Bhattacharya, R. Gupta, W. Lee, and S. Sharpe) Los Alamos report LA-UR-99-4973, June 1999. ori:oai:arXiv.org:hep-lat/9909115 Proceedings of the 17th International Symposium on Lattice Field Theory, Pisa, Italy, 1999, Eds. M. Campostrini, et al., Nuclear Physics (Proceedings Supplement) B83-84 (2000) 851–853; ori:doi:10.1016/S0920-5632(00)00462-X. [inspire]. 6 citations as of Apr 13, 2011.
  119. Non-perturbative Improvement of Bilinears in Unquenched QCD. (T. Bhattacharya, R. Gupta, W. Lee, and S. Sharpe) Los Alamos report LA-UR-99-4974 and University of Washington report UW-PT/99-21, June 1999. ori:oai:arXiv.org:hep-lat/9909092 Proceedings of the 17th International Symposium on Lattice Field Theory, Pisa, Italy, 1999, Eds. M. Campostrini, et al., Nuclear Physics (Proceedings Supplement) B83-84 (2000) 902–904; ori:doi:10.1016/S0920-5632(00)00410-2. [inspire]. 8 citations as of Apr 13, 2011.
  120. Dynamics of the Conformal Mode and Simplicial Gravity. (S. Catterall, E. Mottola, and T. Bhattacharya) ori:oai:arXiv.org:hep-lat/9809114 Proceedings of the 16th International Symposium on Lattice Field Theory, Boulder, Colorado, USA, 1998, Eds. T. De Grand, et al., Nuclear Physics (Proceedings Supplement) B73 (1999) 792–794; ori:doi:10.1016/S0920-5632(99)85205-0. [inspire]. 1 citation as of Apr 13, 2011.
  121. Non-perturbative Renormalization Constants using Ward Identities. (T. Bhattacharya, S. Chandrasekharan, R. Gupta, W. Lee, and S. Sharpe) Los Alamos report LA-UR-98-4267, July 1998. ori:oai:arXiv.org:hep-lat/9810018 Proceedings of the 16th International Symposium on Lattice Field Theory, Boulder, Colorado, USA, 1998, Eds. T. De Grand, et al., Nuclear Physics (Proceedings Supplement) B73 (1999) 276–278; ori:doi:10.1016/S0920-5632(99)85046-4. [inspire]. 6 citations as of Apr 13, 2011.
  122. fB and fBs using NRQCD. (T. Bhattacharya) Los Alamos report LAUR-98-4266, July 1998. ori:oai:arXiv.org:hep-lat/9810015 Proceedings of the 16th International Symposium on Lattice Field Theory, Boulder, Colorado, USA, 1998, Eds. T. De Grand, et al., Nuclear Physics (Proceedings Supplement) B73 (1999) 369–371; ori:doi:10.1016/S0920-5632(99)85076-2. [inspire]. 2 citations as of Apr 13, 2011.
  123. Light Fermion Masses from Lattice QCD. (T. Bhattacharya) Proceedings of American Physical Society, APS/AAPT Joint April Meeting, Columbus, Ohio, USA, 18–21 April 1998, Abstract #3WK.06
  124. Hadron Spectroscopy with NRQCD b quarks. (C. Davies, A. Ali Khan, J. Shigemitsu, J. Sloan, S. Collins, T. Bhattacharya, and R. Gupta) Proceedings of American Physical Society, APS/AAPT Joint April Meeting, Columbus, Ohio, USA, 18–21 April 1998, Abstract #M16.84
  125. Advances in Determination of Quark Masses. (T. Bhattacharya and R. Gupta) Los Alamos report LAUR-97-4355, July 1997. ori:oai:arXiv.org:hep-lat/9710095 Proceedings of the 15th International Symposium on Lattice Field Theory, Edinburgh, Scotland, 1997, Eds. C.T.H. Davies, et al., Nuclear Physics (Proceedings Supplement) B63 (1998) 95–107; ori:doi:10.1016/S0920-5632(97)00701-9. [inspire]. 26 citations as of Apr 13, 2011.
  126. Problems with Conventional Sum Rule Analyses for the Light Quark Masses and a New Analysis of ms. (Kim Maltman Rajan Gupta, and Tanmoy Bhattacharya) Proceedings of the 15th International Conference On Few-Body Problems In Physics (FB 97), Groningen, the Netherlands, 1996, Eds. J.C.S. Bacelar, et al., Nuclear Physics A631 (1998) 497c–501c; ori:doi:10.1016/S0375-9474(98)00055-4. [inspire]. 3 citations as of Apr 13, 2011.
  127. Sum Rule Analyses for The Light Quark Masses Revisited. (Kim Maltman R. Gupta, and T. Bhattacharya) Proceedings of the 6th Conference On The Intersections Of Particle And Nuclear Physics (CIPANP 97), Big Sky, Montana, USA, 1997, Ed. T.W. Donnely, AIP Conference Proceedings 412 (1997) 736–738; (abstract available online)
  128. B and Bc Mesons with NRQCD and Clover Actions. (A. Ali Khan and T. Bhattacharya) Los Alamos report LA-UR-96-3338, May 1996. ori:oai:arXiv.org:hep-lat/9609048 Proceedings of the 14th International Symposium on Lattice Field Theory, St. Louis, USA, 1996, Eds. C. Bernard, et al., Nuclear Physics (Proceedings Supplement) B53 (1997) 368–373; ori:doi:10.1016/S0920-5632(96)00662-7. [inspire]. 11 citations as of Apr 13, 2011.
  129. Light Quark Masses and the CP violation parameter ε'/ε. (R. Gupta and T. Bhattacharya) Los Alamos report LA-UR-96-3337, June 1996. ori:oai:arXiv.org:hep-lat/9609046 Proceedings of the 14th International Symposium on Lattice Field Theory, St. Louis, USA, 1996, Eds. C. Bernard, et al., Nuclear Physics (Proceedings Supplement) B53 (1997) 292–294; ori:doi:10.1016/S0920-5632(96)00640-8. [inspire]. 9 citations as of Apr 13, 2011.
  130. Comparison of Inversion Algorithms for Wilson Fermions on the CM5. (R. Gupta, T. Bhattacharya, and G. Kilcup) Los Alamos report LA-UR-96-1115, May 1996. ori:oai:arXiv.org:hep-lat/9605029 (Talk presented at Workshop on Accelerating Fermion Algorithms, Jülich, February 1996) 3 citations as of Apr 13, 2011.
  131. Testing the Chiral Behaviour of the Hadron Spectrum. (T. Bhattacharya, R. Gupta, and S. Sharpe) Los Alamos report LA-UR-95-4224, December 1995. ori:oai:arXiv.org:hep-lat/9512005 Proceedings of the 13th International Symposium on Lattice Field Theory, Melbourne, Australia, 1995, Eds. T. Kieu, et al., Nuclear Physics (Proceedings Supplement) B47 (1996) 549–552; ori:doi:10.1016/0920-5632(96)00119-3. [inspire]. 3 citations as of Apr 13, 2011.
  132. Status Report on Weak Matrix Element Calculations. (R. Gupta and T. Bhattacharya) Los Alamos report LA-UR-95-4223, December 1995. ori:oai:arXiv.org:hep-lat/9512006 Proceedings of the 13th International Symposium on Lattice Field Theory, Melbourne, Australia, 1995, Eds. T. Kieu, et al., Nuclear Physics (Proceedings Supplement) B47 (1996) 473–480; ori:doi:10.1016/0920-5632(96)00104-1. [inspire]. 10 citations as of Apr 13, 2011.
  133. Lattice Analysis of Semi-Leptonic Form Factors. (T. Bhattacharya and R. Gupta) Los Alamos report LA-UR-95-4222, December 1995. ori:oai:arXiv.org:hep-lat/9512007 Proceedings of the 13th International Symposium on Lattice Field Theory, Melbourne, Australia, 1995, Eds. T. Kieu, et al., Nuclear Physics (Proceedings Supplement) B47 (1996) 481–484; ori:doi:10.1016/0920-5632(96)00105-3. [inspire]. 19 citations as of Apr 13, 2011.
  134. Phenomenology from 100 Large Lattices. (T. Bhattacharya and R. Gupta) Los Alamos report LA-UR-95-72, September 1994. ori:oai:arXiv.org:hep-lat/9501016 Proceedings of the 12th International Symposium on Lattice Field Theory, Bielefeld, Germany, 1994, Eds. F. Karsch, et al., Nuclear Physics (Proceedings Supplement) B42 (1995) 935–941; ori:doi:10.1016/0920-5632(95)00427-B. [inspire]. 28 citations as of Apr 13, 2011.
  135. Very Large Energy Cumulants of the 2d Potts-Model. (T. Bhattacharya, R. Lacaze, and A. Morel) Proceedings of the 12th International Symposium on Lattice Field Theory, Bielefeld, Germany, 1994, Eds. F. Karsch, et al., Nuclear Physics (Proceedings Supplement) B42 (1995) 743–745; ori:doi:10.1016/0920-5632(95)00368-J. [inspire].
  136. Semileptonic form factors from lattice QCD. (T. Bhattacharya and R. Gupta) Los Alamos report LA-UR-94-3079, August 1994. ori:oai:arXiv.org:hep-ph/9409284 Proceedings of 1994 Meeting of the American Physical Society, Division of Particles and Fields DPF94, Albuquerque, New Mexico, 1995, World Scientific, Ed. Sally Seidel (pages 605–607). [inspire]. 3 citations as of Apr 13, 2011.
  137. A Pot-Pourri of results in QCD from Large Lattice Simulations on the CM5. (T. Bhattacharya and R. Gupta) Los Alamos report LA-UR-93-4459, December 1993. ori:oai:arXiv.org:hep-lat/9312075 Proceedings of the 11th International Symposium on Lattice Field Theory, Dallas, Texas, 1993, Eds. T. Draper, et al., Nuclear Physics (Proceedings Supplement) B34 (1995) 341–346; ori:doi:10.1016/0920-5632(94)90385-9. [inspire]. 1 citation as of Apr 13, 2011.
  138. The Free Energy of the Potts Model. (T. Bhattacharya, R. Lacaze, and A. Morel) Proceedings of the 11th International Symposium on Lattice Field Theory, Dallas, Texas, 1993, Eds. T. Draper, et al., Nuclear Physics (Proceedings Supplement) B34 (1994) 671–673; ori:doi:10.1016/0920-5632(94)90478-2. [inspire]. 4 citations as of Apr 13, 2011.
  139. Surface Tension in QCD. (T. Bhattacharya, A. Gocksch, C.P. Korthals Altes, and R.D. Pisarski) Brookhaven Preprint BNL-45574, December 1990. Proceedings of the 8th International Symposium on Lattice Field Theory, Tallahassee, Florida, 1990, Eds. Fukugita, et al., Nuclear Physics (Proceedings Supplement) B20 (1991) 305–308; ori:doi:10.1016/0920-5632(91)90931-4. [inspire]. 1 citation as of Apr 13, 2011.

Unpublished papers

Some work was meant for peer review, but never completed or published in such a forum, nor formally published in an unrefereed forum. Some of these may, however, be available as preprints and are listed here. Talks at unrefereed conferences that were not published in proceedings or elsewhere are in the previous section, not here, as are papers rejected from conferences that make such papers available on the web.

  1. Identifying Sources of Mismatches in an Abstaining Classifier for Text Reports on Cancer Pathology (Sayera Dhaubhadel, Jamaludin Mohd-Yusof, Kumkum Ganguly, Sunil Thulasidasan, Nicolas Hengartner, Brent J. Mumphrey, Eric B. Durban, Georgia Tourassi, Linda Coyle, Lynne Penberthy, Benjamin McMahon, and Tanmoy Bhattacharya) Los Alamos report LA-UR-21-29019 and LA-UR-21-31252. Proceedings of the Seventh Computational Approaches for Cancer Workshop (CAFCW21), 14 November 2021, 2023 Unpublished
  2. A Two-Phase Classifier for Primary Site and Histological Type in Clinical Cancer Text (Gopinath Chennupati, Sunil Thulasidasan, Benjamin McMahon, Kumkum Ganguly, Sayera Dhaubhadel, Jamaludin Mohd-Yusof, Nicolas W. Hengartner, Lynne Penberthy, and Tanmoy Bhattacharya) Los Alamos report LA-UR-20-27386 2022 Rejected.
  3. A Control Theoretic Approach to Robust Learning in the Presence of Label Noise (Sunil Thulasidasan, Aqueel Jivan, Tanmoy Bhattacharya, Gopinath Chennupati, and Jeffrey Bilmes) 2022 Rejected from AISTATS22.
  4. Feature Determinants for Tissue Classification with Transcriptomic Data (Sayera Dhaubhadel, Kumkum Ganguly, Tanmoy Bhattacharya, Judith D. Cohn, Benjamin McMahon) 2021 Incomplete
  5. Towards a more realistic elementary model of language evolution or Devising Null Models of Lexicostatistics and Glottochronology (Nancy Retzlaff, Matteo Morini, Artemy Kolchinsky, Hamza Giaffar, Anamaria Berea, Sina Tafazoli, Peter F. Stadler, David Wolpert, William Croft, Richard A. Blythe, and Tanmoy Bhattacharya) 2021 Incomplete.
  6. Ensuring consistency of physical laws across scales in large multiscale simulations (Sumantra Sarkar, Yen Ting Lin, Sandrasegaram Gnanakaran, Tanmoy Bhattacharya, and Nicolas W. Hengartner) Los Alamos report LA-UR-20-29949 . 2020 Incomplete.
  7. Statistical properties of the λ measure of phylogenetic signal (Anne Kandler, Laura Fortunato, Mark Galassi, and Tanmoy Bhattacharya) Los Alamos report LA-UR-15-23517, May 11, 2014. 2018 Incomplete.
  8. A Theory of Adaptive Systems (Tanmoy Bhattacharya and John H. Miller) 2017 Incomplete.
  9. Event-driven non-cooperative games. (David Wolpert, Justin Grana, Tanmoy Bhattacharya, Brendan Tracey and James Bono) 2016 Rejected
    subsumes
    Event-driven non-cooperative games. (David H. Wolpert, Tanmoy Bhattacharya, Russel Bent, Joshua Neil, Alexander Kent and Annarita Giani) Los Alamos report LA-UR-13-22238, Mar 2013. Rejected.
  10. Automatic Estimation of Transmitted Founder Variants in Acute HIV-1 Infection. (Lily Blair, Elena E. Giorgi, Will Fischer, Ranjit Warrier, Sampa Santra, George Shaw, Bette Korber, and Tanmoy Bhattacharya) 2013 Incomplete.
  11. Universal replication and the origins of biological diversity. (Sara Imari Walker and Tanmoy Bhattacharya) Los Alamos report LA-UR-13-25377 July 2013. Rejected.
  12. Inferring Malware Evolution with Probabilistic Phylogenetic Models (Guanhua Yan, Tanmoy Bhattacharya, Nathan Brown) 2012 Incomplete.
  13. Computationally-Identified Mutations Suspected to Cause gp120 Charge Inversion and gp41-Mediated Allosteric Effects Impact HIV-1 Susceptibility to Neutralization. (Anthony R. Geonnotti, S. Gnanakaran, Marcus G. Daniels, Tanmoy Bhattacharya, Alan S. Lapedes, Bette Korber, and David C. Montefiori), 2011 Incomplete.
  14. Maternal and paternal imprinted genes oppositely influence risk-based decision making (Claire L. Dent, Trevor Humby, Antonius Plagge, Tanmoy Bhattacharya, Andrew Ward, Lawrence S. Wilkinson, Jon F. Wilkins, and Anthony R. Isles) Los Alamos report LA-UR-06-6156, September 2006. Rejected.
  15. Tapping the Cellular Telephone: processive vs random search (Tanmoy Bhattacharya and Animesh Ray) March 1990 Rejected.
  16. Comment on “Anomalous weight reduction on a gyroscope's right rotation around the vertical axis on the Earth” (D. Atwood, T. Bhattacharya, M. Goldhaber, and A.D. Jackson) BNL preprint, February 1990. Rejected.
  17. Comment on the Claimed Non-observablity of Proton Decay (T. Bhattacharya) BNL preprint. February 1990 Rejected.

Papers by Collaborations

Papers by collaborations to which I belong sometimes include the collaboration, but not me explicitly, as an author. I list those publications here (some peer reviewed, some not). These are usually not considered my publications for bibliometric purposes.

  1. Deep sequential neural network models improve stratification of suicide attempt risk among US veterans (Carianne Martinez, Drew Levin, Jessica Jones, Patrick D. Finley, Benjamin McMahon, Sayera Dhaubhadel, Judith Cohn, Million Veteran Program, Million Veteran Program Suicide Exemplar Workgroup (Khushbu Agarwal, Allison E Ashley-Koch, Mihaela Aslan, Jean C Beckham, Edmond Begoli, Tanmoy Bhattacharya, Ben Brown, Patrick S Calhoun, Mikaels S Cashman McDevitt, Kei-Hoi Cheung, Sutanay Choudhury, Ashley M Cliff, Judith D Cohn, Silvia Crivelli, Leticia Cuellar-Hengartner, Haedi E Deangelis, Michelle F Dennis, Sayera Dhaubhadel, Patrick D Finley, Kumkum Ganguly, Michael R Garvin, Joel E Gelernter, Lauren P Hair, Phillip D Harvey, Elizabeth R Hauser, Michael A Hauser, Nick W Hengartner, Daniel A Jacobson, Piet C Jones, David Kainer, Alan D Kaplan, Ira R Katz, Rachel L Kember, Nathan A Kimbrel, Angela C Kirby, John C Ko, Beauty Kolade, John H Lagergren, Matthew J Lane, Daniel F Levey, Drew Levin, Jennifer H Lindquist, Xianlian Liu, Ravi K Madduri, Carrie Manore, Susana B Martins, John F McCarthy, Benjamin H McMahon, Izaak Miller, Destinee Morrow, David W Oslin, Mirko Pavicic-Venegas, John Pestian, Saiju Pyarajan, Xue J Qin, Nallakkandi Rajeevan, Christine M Ramsey, Ruy Ribeiro, Jonathan Romero, Alex Rodriguez, Daniel Santel, Noah Schaefferkoetter, Yunling Shi, Murray B Stein, Kyle Sullivan, Ning Sun, Suzanne R Tamang, Alice Townsend, Jodie A Trafton, Angelica Walker, Xiange Wang, Victoria Wangia-Anderson, Renji Yang, Hong-Jun Yoon, Shinjae Yoo, Rafael Zamora-Resendiz, Hongyu Zhao), David W. Oslin, Nathan A. Kimbrel, Jean C. Beckham) Journal of the American Medical Informatics Association 31:1 (Jan 1, 2024) 220–230; ori:doi:10.1093/jamia/ocad167.
  2. Identification of Novel, Replicable Genetic Risk Loci for Suicidal Thoughts and Behaviors Among US Military Veterans (Nathan A Kimbrel, Allison E Ashley-Koch, Xue J Qin, Jennifer H Lindquist, Melanie E Garrett, Michelle F Dennis, Lauren P Hair, Jennifer E Huffman, Daniel A Jacobson, Ravi K Madduri, Jodie A Trafton, Hilary Coon, Anna R Docherty, Niamh Mullins, Douglas M Ruderfer, Philip D Harvey, Benjamin H McMahon, David W Oslin, Jean C Beckham, Elizabeth R Hauser, and Michael A Hauser; Million Veteran Program Suicide Exemplar Workgroup (Khushbu Agarwal, Allison E Ashley-Koch, Mihaela Aslan, Jean C Beckham, Edmond Begoli, Tanmoy Bhattacharya, Ben Brown, Patrick S Calhoun, Kei-Hoi Cheung, Sutanay Choudhury, Ashley M Cliff, Judith D Cohn, Silvia Crivelli, Leticia Cuellar-Hengartner, Haedi E Deangelis, Michelle F Dennis, Sayera Dhaubhadel, Patrick D Finley, Kumkum Ganguly, Michael R Garvin, Joel E Gelernter, Lauren P Hair, Phillip D Harvey, Elizabeth R Hauser, Michael A Hauser, Nick W Hengartner, Daniel A Jacobson, Piet C Jones, David Kainer, Alan D Kaplan, Ira R Katz, Rachel L Kember, Nathan A Kimbrel, Angela C Kirby, John C Ko, Beauty Kolade, John H Lagergren, Matthew J Lane, Daniel F Levey, Drew Levin, Jennifer H Lindquist, Xianlian Liu, Ravi K Madduri, Carrie Manore, Susana B Martins, John F McCarthy, Mikaela McDevitt-Cashman, Benjamin H McMahon, Izaak Miller, Destinee Morrow, David W Oslin, Mirko Pavicic-Venegas, John Pestian, Saiju Pyarajan, Xue J Qin, Nallakkandi Rajeevan, Christine M Ramsey, Ruy Ribeiro, Alex Rodriguez, Jonathan Romero, Daniel Santel, Noah Schaefferkoetter, Yunling Shi, Murray B Stein, Kyle Sullivan, Ning Sun, Suzanne R Tamang, Alice Townsend, Jodie A Trafton, Angelica Walker, Xiange Wang, Victoria Wangia-Anderson, Renji Yang, Hong-Jun Yoon, Shinjae Yoo, Rafael Zamora-Resendiz, Hongyu Zhao), the International Suicide Genetics Consortium (Anna R Docherty, Niamh Mullins, Jonathan R I Coleman, Andrey Shabalin, JooEun Kang, Balasz Murnyak, Frank Wendt, Mark Adams, Adrian I Campos, Emily DiBlasi, Janice M Fullerton, Henry R Kranzler, Amanda Bakian, Eric T Monson, Miguel E Rentería, Ole A Andreassen, Cynthia M Bulik, Howard J Edenberg, Ronald C Kessler, J John Mann, John I Nurnberger Jr, Giorgio Pistis, Fabian Streit, Robert J Ursano, Swapnil Awasthi, Andrew W Bergen, Wade H Berrettini, Martin Bohus, Harry Brandt, Xiao Chang, Hsi-Chung Chen, Wei J Chen, Erik D Christensen, Steven Crawford, Scott Crow, Philibert Duriez, Alexis C Edwards, Fernando Fern´ndez-Aranda, Manfred M Fichter, Hanga Galfalvy, Steven Gallinger, Michael Gandal, Philip Gorwood, Yiran Guo, Jonathan D Hafferty, Hakon Hakonarson, Katherine A Halmi, Akitoyo Hishimoto, Sonia Jain, Stéphane Jamain, Susana Jiméez-Murcia, Craig Johnson, Allan S Kaplan, Walter H Kaye, Pamela K Keel, James L Kennedy, Minsoo Kim, Kelly L Klump, Daniel F Levey, Dong Li, Shih-Cheng Liao, Klaus Lieb, Lisa Lilenfeld, Adriana Lori, Pierre J Magistretti, Christian R Marshall, James E Mitchell, Richard M Myers, Satoshi Okazaki, Ikuo Otsuka, Dalila Pinto, Abigail Powers, Nicolas Ramoz, Stephan Ripke, Stefan Roepke, Vsevolod Rozanov, Stephen W Scherer, Christian Schmahl, Marcus Sokolowski, Anna Starnawska, Michael Strober, Mei-Hsin Su, Laura M Thornton, Janet Treasure, Erin B Ware, Hunna J Watson, Stephanie H Witt, D Blake Woodside, Zeynep Yilmaz, Lea Zillich, Esben Agerbo, Anders D Børglum, Gerome Breen, Ditte Demontis, Annette Erlangsen, Tõnu Esko, Joel Gelernter, Stephen J Glatt, David M Hougaard, Hai-Gwo Hwu, Po-Hsiu Kuo, Cathryn M Lewis, Qingqin S Li, Chih-Min Liu, Nicholas G Martin, Andrew M McIntosh, Sarah E Medland, Ole Mors, Merete Nordentoft, John I Nurnberger Jr, Catherine Olsen, David Porteous, Daniel J Smith, Eli A Stahl, Murray B Stein, Danuta Wasserman, Thomas Werge, David C Whiteman, Virginia Willour, Hilary Coon, Douglas M Ruderfer), the Veterans Affairs Mid-Atlantic Mental Illness Research, Education, and Clinical Center Workgroup (Eric Dedert, Eric B Elbogen, John A Fairbank, Robin A Hurley, Jason D Kilts, Sarah L Martindale, Christine E Marx, Scott D McDonald, Scott D Moore, Rajendra A Morey, Jennifer C Naylor, Jared Rowland, Robert D Shura, Cindy Swinkels, Larry A Tupler, Elizabeth E Van Voorhees, Ruth Yoash-Gantz), and the Veterans Affairs Million Veteran Program (J Michael Gaziano, Sumitra Muralidhar, Rachel Ramoni, Kyong-Mi Chang, Christopher J O'Donnell, Philip S Tsao, James Breeling, Elizabeth Hauser, Yan Sun, Grant Huang, Juan P Casas, Jennifer Moser, Stacey B Whitbourne, Jessica V Brewer, Todd Conner, Dean P Argyres, Brady Stephens, Mary T Brophy, Donald E Humphries, Luis E Selva, Nhan Do, Shahpoor Alex Shayan, Kelly Cho, Lori Churby, Peter Wilson, Rachel McArdle, Louis Dellitalia, Kristin Mattocks, John Harley, Jeffrey Whittle, Frank Jacono, John Wells, Salvador Gutierrez, Gretchen Gibson, Kimberly Hammer, Laurence Kaminsky, Gerardo Villareal, Scott Kinlay, Junzhe Xu, Mark Hamner, Roy Mathew, Sujata Bhushan, Pran Iruvanti, Michael Godschalk, Zuhair Ballas, Douglas Ivins, Stephen Mastorides, Jonathan Moorman, Saib Gappy, Jon Klein, Nora Ratcliffe, Hermes Florez, Olaoluwa Okusaga, Maureen Murdoch, Peruvemba Sriram, Shing Shing Yeh, Neeraj Tandon, Darshana Jhala, Suthat Liangpunsakul, Kris Ann Oursler, Mary Whooley, Sunil Ahuja, Joseph Constans, Paul Meyer, Jennifer Greco, Michael Rauchman, Richard Servatius, Melinda Gaddy, Agnes Wallbom, Timothy Morgan, Todd Stapley, Scott Sherman, George Ross, Patrick Strollo, Edward Boyko, Laurence Meyer, Samir Gupta, Mostaqul Huq, Joseph Fayad, Adriana Hung, Jack Lichy, Robin Hurley, Brooks Robey, Robert Striker)) Journal of American Medical Association 80:2 (Feb 1, 2023) 135–145; ori:doi:10.1001/jamapsychiatry.2022.3896. pmid:36515925; PMC9857322.
  3. Genome-wide association study identifies four pan-ancestry loci for suicidal ideation in the Million Veteran Program ( Allison E Ashley-Koch, Nathan A Kimbrel, Xue J Qin, Jennifer H Lindquist, Melanie E Garrett, Michelle F Dennis, Lauren P Hair, Jennifer E Huffman, Daniel A Jacobson, Ravi K Madduri, Hilary Coon, Anna R Docherty, Jooeun Kang, Niamh Mullins, Douglas M Ruderfer, the Veterans Affairs Million Veteran Program, Million Veteran Program Suicide Exemplar Workgroup (Khushbu Agarwal, Allison E Ashley-Koch, Mihaela Aslan, Jean C Beckham, Edmond Begoli, Tanmoy Bhattacharya, Ben Brown, Patrick S Calhoun, Mikaela Cashman McDevitt, Kei-Hoi Cheung, Sutanay Choudhury, Ashley M Cliff, Judith D Cohn, Silvia Crivelli, Leticia Cuellar-Hengartner, Haedi E Deangelis, Michelle F Dennis, Sayera Dhaubhadel, Patrick D Finley, Kumkum Ganguly, Michael R Garvin, Joel E Gelernter, Lauren P Hair, Phillip D Harvey, Elizabeth R Hauser, Michael A Hauser, Nick W Hengartner, Daniel A Jacobson, Piet C Jones, David Kainer, Alan D Kaplan, Ira R Katz, Rachel L Kember, Nathan A Kimbrel, Angela C Kirby, John C Ko, Beauty Kolade, John H Lagergren, Matthew J Lane, Daniel F Levey, Drew Levin, Jennifer H Lindquist, Xianlian Liu, Ravi K Madduri, Carrie Manore, Susana B Martins, John F McCarthy, Benjamin H McMahon, J. Izaak Miller, Destinee Morrow, David W Oslin, Mirko Pavicic-Venegas, John Pestian, Saiju Pyarajan, Xue J Qin, Nallakkandi Rajeevan, Christine M Ramsey, Ruy Ribeiro, Jonathan Romero, Alex Rodriguez, Daniel Santel, Noah Schaefferkoetter, Yunling Shi, Murray B Stein, Kyle Sullivan, Ning Sun, Suzanne R Tamang, Alice Townsend, Jodie A Trafton, Angelica Walker, Xiange Wang, Victoria Wangia-Anderson, Renji Yang, Hong-Jun Yoon, Shinjae Yoo, Rafael Zamora-Resendiz, Hongyu Zhao), the International Suicide Genetics Consortium, Philip D Harvey, Benjamin H McMahon, David W Oslin, Jean C Beckham, Elizabeth R Hauser, and Michael A Hauser) Public Library of Science Genetics 19:3 (2023) e1010623; ori:doi:10.1371/journal.pgen.1010623.
  4. Using iterative random forest to find geospatial environmental and Sociodemographic predictors of suicide attempts or Using Explainable-AI to Find Geospatial Environmental and Sociodemographic Predictors of Suicide Attempts ( Mirko Pavicic, Angelica M Walker, Kyle A Sullivan, John Lagergren, Ashley Cliff, Jonathan Romero, Jared Streich, Michael R Garvin for the Million Veteran Program Suicide Exemplar Workgroup (Khushbu Agarwal, Allison E Ashley-Koch, Mihaela Aslan, Jean C Beckham, Edmond Begoli, Tanmoy Bhattacharya, Ben Brown, Patrick S Calhoun, Mikaela Cashman McDevitt, Kei-Hoi Cheung, Sutanay Choudhury, Ashley M Cliff, Judith D Cohn, Silvia Crivelli, Leticia Cuellar-Hengartner, Haedi E Deangelis, Michelle F Dennis, Sayera Dhaubhadel, Patrick D Finley, Kumkum Ganguly, Michael R Garvin, Joel E Gelernter, Lauren P Hair, Phillip D Harvey, Elizabeth R Hauser, Michael A Hauser, Nick W Hengartner, Daniel A Jacobson, Piet C Jones, David Kainer, Alan D Kaplan, Ira R Katz, Rachel L Kember, Nathan A Kimbrel, Angela C Kirby, John C Ko, Beauty Kolade, John H Lagergren, Matthew J Lane, Daniel F Levey, Drew Levin, Jennifer H Lindquist, Xianlian Liu, Ravi K Madduri, Carrie Manore, Susana B Martins, John F McCarthy, Benjamin H McMahon, J. Izaak Miller, Destinee Morrow, David W Oslin, Mirko Pavicic-Venegas, John Pestian, Saiju Pyarajan, Xue J Qin, Nallakkandi Rajeevan, Christine M Ramsey, Ruy Ribeiro, Jonathan Romero, Alex Rodriguez, Daniel Santel, Noah Schaefferkoetter, Yunling Shi, Murray B Stein, Kyle Sullivan, Ning Sun, Suzanne R Tamang, Alice Townsend, Jodie A Trafton, Angelica Walker, Xiange Wang, Victoria Wangia-Anderson, Renji Yang, Shinjae Yoo, Hong-Jun Yoon, Rafael Zamora-Resendiz, Hongyu Zhao), the Veterans Affairs Million Veteran Program, John Pestian, Benjamin McMahon, David W Oslin, Jean C Beckham, Nathan A Kimbrel, and Daniel A Jacobson) medRxiv 2022.04.26.22274333 ori:doi:2022.04.26.22274333 Frontiers in Psychiatry 14 (2023) 1178633; ori:doi:10.3389/fpsyt.2023.1178633. pmid:37599888; PMC10433206.
  5. An examination of the association between altitude and suicide deaths, suicide attempts, and suicidal ideation among veterans at both the patient and geospatial level ( Xiange Wang, Rafael Zamora-Resendiz, Courtney D Shelley, Carrie Manore, Xinlian Liu, David W Oslin, Benjamin McMahon, Jean C Beckham, Nathan A Kimbrel, Million Veteran Program Suicide Exemplar Workgroup, and Silvia Crivelli) Journal of Psychiatric Research 153 (2022) 276–283; ori:doi:10.1016/j.jpsychires.2022.07.017.
  6. Continuous-time probabilistic models for longitudinal electronic health records ( Alan D Kaplan, Uttara Tipnis, Jean C Beckham, Nathan A Kimbrel, David W Oslin, Benjamin H McMahon, and Million Veteran Program Suicide Exemplar Workgroup (Khushbu Agarwal, Allison E Ashley-Koch, Mihaela Aslan, Jean C Beckham, Edmond Begoli, Tanmoy Bhattacharya, Ben Brown, Patrick S Calhoun, Mikaela Cashman McDevitt, Kei-Hoi Cheung, Sutanay Choudhury, Ashley M Cliff, Judith D Cohn, Silvia Crivelli, Leticia Cuellar-Hengartner, Haedi E Deangelis, Michelle F Dennis, Sayera Dhaubhadel, Patrick D Finley, Kumkum Ganguly, Michael R Garvin, Joel E Gelernter, Lauren P Hair, Phillip D Harvey, Elizabeth R Hauser, Michael A Hauser, Nick W Hengartner, Daniel A Jacobson, Piet C Jones, David Kainer, Alan D Kaplan, Ira R Katz, Rachel L Kember, Nathan A Kimbrel, Angela C Kirby, John C Ko, Beauty Kolade, John H Lagergren, Matthew J Lane, Daniel F Levey, Drew Levin, Jennifer H Lindquist, Xianlian Liu, Ravi K Madduri, Carrie Manore, Susana B Martins, John F McCarthy, Benjamin H McMahon, J. Izaak Miller, Destinee Morrow, David W Oslin, Mirko Pavicic-Venegas, John Pestian, Saiju Pyarajan, Xue J Qin, Nallakkandi Rajeevan, Christine M Ramsey, Ruy Ribeiro, Jonathan Romero, Alex Rodriguez, Daniel Santel, Noah Schaefferkoetter, Yunling Shi, Murray B Stein, Kyle Sullivan, Ning Sun, Suzanne R Tamang, Alice Townsend, Jodie A Trafton, Angelica Walker, Xiange Wang, Victoria Wangia-Anderson, Renji Yang, Shinjae Yoo, Hong-Jun Yoon, Rafael Zamora-Resendiz, and Hongyu Zhao)) Journal of Psychiatric Research 130 (2022) 104084; ori:doi:10.1016/j.jbi.2022.104084.
  7. On trace anomaly in 2+1 flavor QCD (P. Petreczky, for the HotQCD Collaboration) ori:oai:arXiv.org:1211.1678 [hep-lat] Proceedings of the 30th International Symposium on Lattice Field Theory, Cairns, Australia, 2012. Eds. Leinweber, et al. Proceedings of Science Lattice 2012 (2012) 069; ori:doi:10.22323/1.164.0069 [inspire].
  8. The QCD equation of state with 2+1 flavors of Highly Improved Staggered Quarks (HISQ) (Alexei Bazavov, for the HotQCD collaboration) Proceedings of the Quark Matter 2012 International Conference, Washington DC, USA, August 13–18 2012. ori:oai:arXiv.org:1210.6312 [hep-lat] [inspire].
  9. Universal critical behavior and the transition temperature in (2+1)-flavor QCD (Christian Schmidt, for HotQCD) Proceedings of the IX International Conference on Quark Confinement and the Hadron Spectrum (QCHS IX), Madrid, Spain, 30 Aug–3 Sep 2010. AIP Conference Proceedings 1343 (2011) 513–515. ori:doi:10.1063/1.3575079 [inspire].
  10. The finite temperature phase transition from domain wall fermions (Michael Cheng, for the HotQCD collaboration) Proceedings of the 29th International Symposium on Lattice Field Theory, Lake Tahoe, California, USA, July 10–16 2011. ori:oai:arXiv.org:1205.3526 [hep-lat] Proceedings of Science LATTICE 2011 (2012) 186; ori:doi:10.22323/1.139.0186 [inspire].
  11. Chiral transition temperature and aspects of deconfinement in 2+1 flavor QCD with the HISQ/tree action or Determination of the transition temperature Tc in 2+1 flavor QCD: combined result with the p4, asqtad and HISQ/tree actions (Alexei Bazavov, for the HotQCD collaboration) Proceedings of the 29th International Symposium on Lattice Field Theory, Lake Tahoe, California, USA, July 10–16 2011. ori:oai:arXiv.org:1201.5345 [hep-lat] Proceedings of Science LATTICE 2011 (2012) 182; ori:doi:10.22323/1.139.0182 [inspire].
  12. Dirac Eigenvalue Spectrum at Finite Temperature Using Domain Wall Fermions (Zhongjie Lin, for the HotQCD collaboration) Proceedings of the 29th International Symposium on Lattice Field Theory, Lake Tahoe, California, USA, July 10–16 2011. ori:oai:arXiv.org:1111.0988 [hep-lat] Proceedings of Science LATTICE 2011 (2012) 204; ori:doi:10.22323/1.139.0204 [inspire].
  13. Fluctuations and Higher Moments of Conserved Charges from the Lattice (Prasad Hegde, for the HotQCD collaboration) Proceedings of the 19th Particles & Nuclei International Conference (PANIC 2011), Cambridge, Massachusetts, USA, July 24–30 2011. ori:oai:arXiv.org:1110.5932 [hep-lat] [inspire].
  14. Chiral Aspects of Improved Staggered Fermions with 2+1-Flavors from the HotQCD Collaboration (Wolfgang Söldner, for the HotQCD collaboration) Proceedings of the 28th International Symposium on Lattice Field Theory, Villasimius, Italy, July 14–19 2010. ori:oai:arXiv.org:1012.4484 [hep-lat] Proceedings of Science LATTICE 2010 (2011) 215; ori:doi:10.22323/1.105.0215 [inspire].
  15. The QCD equation of state and transition at finite temperature (Michael Cheng, for HotQCD) Proceedings of the 27th International Symposium on Lattice Field Theory, Beijing, China, July 26–31 2009. ori:oai:arXiv.org:0912.0044 [hep-lat] Proceedings of Science LAT2009 (2010) 175; ori:doi:10.22323/1.091.0175 [inspire].
  16. The HotQCD Equation of State (R.A. Schmidt for HotQCD Collaboration) Proceedings of the Quark Matter 2009, Knoxville, Tennessee, March 30–April 4 2009. ori:oai:arXiv.org:0908.1951 [hep-lat] Nuclear Physics A830:1–4 (2009) 725c–728c; ori:doi:10.1016/j.nuclphysa.2009.09.061. [inspire].
  17. QCD thermodynamics at zero and non-zero density (Christian Schmidt for RBC-Bielefeld and HotQCD Collaboration) Proceedings of the Strong and Electroweak Matter, Amsterdam, the Netherlands, August 26–29 2008. ori:oai:arXiv.org:0810.4024 [hep-lat] [inspire].
  18. Quark Mass Dependence of the QCD Equation of State on N_tau=8 Lattices (Wolfgang Söldner for RBC-Bielefeld and HotQCD Collaboration) Proceedings of the 26th International Symposium on Lattice Field Theory, Williamsburg, Virginia, USA, July 14–19 2008. ori:oai:arXiv.org:0810.2468 [hep-lat] Proceedings of Science LATTICE 2008 (2009) 173; ori:doi:10.22323/1.066.0173 [inspire].
  19. The QCD EoS from simulations on BlueGene L Supercomputers at LLNL and NYBlue (Rajan Gupta for HotQCD Collaboration) Proceedings of the 26th International Symposium on Lattice Field Theory, Williamsburg, Virginia, USA, July 14–19 2008. ori:oai:arXiv.org:0810.1764 [hep-lat] Proceedings of Science LATTICE 2008 (2009) 170; ori:doi:10.22323/1.066.0170 [inspire].
  20. QCD Thermodynamics with Domain Wall Fermions (Michael Cheng for RBC-Bielefeld and HotQCD Collaboration) Proceedings of the 26th International Symposium on Lattice Field Theory, Williamsburg, Virginia, USA, July 14–19 2008. ori:oai:arXiv.org:0810.1311 [hep-lat] Proceedings of Science LATTICE 2008 (2009) 180; ori:doi:10.22323/1.066.0180 [inspire].
  21. Lattice QCD thermodynamic results with improved staggered fermions (Christian Schmidt for RBC-Bielefeld, HotQCD Collaboration) Proceedings of the 3rd International Conference on Hard and Electromagnetic Probes of High-Energy Nuclear Collisions Illa de Toxa, Spain, June 8–14 2008. ori:oai:arXiv.org:0810.0374 [hep-lat] [inspire].
  22. Towards a precise determination of Tc with 2+1 flavors of quarks (Carleton DeTar and Rajan Gupta for HotQCD Collaboration) Proceedings of the 25th International Symposium on Lattice Field Theory, Regensburg, Germany, July 30–August 4 2007. ori:oai:arXiv.org:0710.1655 [hep-lat] Proceedings of Science LATTICE 2007 (2008) 179; ori:doi:10.22323/1.042.0179 [inspire].

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Tanmoy Bhattacharya [November 19, 2024]